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v0.0.5 release
No due date Last updated 12 months agoNext minor release. General code clean up Depreciate homopolymer c…
Next minor release.
- General code clean up
- Depreciate homopolymer collapsed motif search
- Add fuzzy regex motif option
- Report metadata with extracted reads in
teloclip-extract
- Log read recovery summary stats per contig
- Exclude "-F" as per samtools and mosdepth to exclude secondary alignments by default. Or exclude alignments with no sequence.
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v0.1.0 Release
No due date Last updated about 1 year agoMajor release. Changes entry points. Add sub-command entry points …
Major release. Changes entry points.
- Add sub-command entry points for basic teloclip functions [filter, extract, extend]
- Add new tool
extend
to automatically extend assembly contigs with overhang sequence. - Auto pipeline: map -> filter -> extract-longest -> extend