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Latest version of Linux "wait" is not compatible with "tee" #6

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qisun2 opened this issue Dec 8, 2022 · 0 comments
Open

Latest version of Linux "wait" is not compatible with "tee" #6

qisun2 opened this issue Dec 8, 2022 · 0 comments

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@qisun2
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qisun2 commented Dec 8, 2022

The "wait" function on new Linux systems (ubuntu or redhat) is not compatible with "tee". "wait" would wait forever for "tee" to finish, and the pipeline would stuck.

To get proseq2.0 to work on latest Linux, commenting out these two lines in the proseq2.0.bsh file

exec > >(tee ${OUTPUT}/proseq2.0_Run_${tmp}.log)
exec 2>&1
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