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env2.yml
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name: enrichseq
channels:
- bioconda
- defaults
- conda-forge
dependencies:
- blast=2.9.0=h58d6d27_1
- boost=1.68.0=py37h9888f84_1001
- boost-cpp=1.68.0=h6f8c590_1000
- bowtie2=2.4.2=py37h0856b40_2
- bracken=2.6.0=py37h502bf93_2
- bzip2=1.0.8=hc929b4f_4
- c-ares=1.17.1=h0d85af4_1
- ca-certificates=2020.12.5=h033912b_0
- cairo=1.16.0=h0ab9d94_1001
- canu=1.4=1
- certifi=2020.12.5=py37hf985489_1
- coreutils=8.31=h0b31af3_0
- curl=7.75.0=h06286d4_0
- expat=2.2.10=h1c7c35f_0
- fontconfig=2.13.1=h1027ab8_1000
- freetype=2.10.4=h4cff582_1
- fribidi=1.0.10=hbcb3906_0
- gettext=0.19.8.1=h7937167_1005
- giflib=5.2.1=hbcb3906_2
- glib=2.66.7=he49afe7_1
- glib-tools=2.66.7=he49afe7_1
- gmp=6.2.1=h2e338ed_0
- gnuplot=5.2.7=hd866d03_2
- gnutls=3.6.13=hc269f14_0
- graphite2=1.3.13=h2e338ed_1001
- harfbuzz=2.4.0=h92b87b8_1
- icu=58.2=h0a44026_1000
- java-jdk=8.0.112=1
- jpeg=9d=hbcb3906_0
- kraken2=2.1.1=pl526ha1b3eb9_0
- krb5=1.17.2=h60d9502_0
- libblas=3.9.0=8_openblas
- libcblas=3.9.0=8_openblas
- libcurl=7.75.0=h8ef9fac_0
- libcxx=11.1.0=habf9029_0
- libedit=3.1.20191231=h0678c8f_2
- libev=4.33=haf1e3a3_1
- libffi=3.3=h046ec9c_2
- libgd=2.2.5=h8cbe2a3_1005
- libgfortran=5.0.0=9_3_0_h6c81a4c_19
- libgfortran5=9.3.0=h6c81a4c_19
- libglib=2.66.7=hd556434_1
- libiconv=1.16=haf1e3a3_0
- libidn2=2.3.0=h0b31af3_0
- liblapack=3.9.0=8_openblas
- libnghttp2=1.43.0=h07e645a_0
- libopenblas=0.3.12=openmp_h54245bb_1
- libpng=1.6.37=h7cec526_2
- libssh2=1.9.0=h52ee1ee_6
- libtiff=4.1.0=ha78913b_3
- libunistring=0.9.10=h1de35cc_0
- libwebp=1.0.2=hd3bf737_5
- libxml2=2.9.9=hd80cff7_2
- llvm-openmp=11.0.1=h7c73e74_0
- lz4-c=1.9.3=h046ec9c_0
- megahit=1.2.9=hfbae3c0_0
- ncurses=6.2=h2e338ed_4
- nettle=3.4.1=h3efe00b_1002
- nextflow=20.10.0=hecda079_0
- numpy=1.20.1=py37ha9839cc_0
- openjdk=8.0.112=zulu8.19.0.1_3
- openssl=1.1.1k=h0d85af4_0
- pango=1.42.4=haa940fe_4
- pcre=8.44=hb1e8313_0
- perl=5.26.2=hbcb3906_1008
- perl-archive-tar=2.32=pl526_0
- perl-carp=1.38=pl526_3
- perl-common-sense=3.74=pl526_2
- perl-compress-raw-bzip2=2.087=pl526h6de7cb9_0
- perl-compress-raw-zlib=2.087=pl526h770b8ee_0
- perl-exporter=5.72=pl526_1
- perl-exporter-tiny=1.002001=pl526_0
- perl-extutils-makemaker=7.36=pl526_1
- perl-filesys-df=0.92=pl526h1de35cc_3
- perl-io-compress=2.087=pl526h6de7cb9_0
- perl-io-zlib=1.10=pl526_2
- perl-json=4.02=pl526_0
- perl-json-xs=2.34=pl526h04f5b5a_3
- perl-list-moreutils=0.428=pl526_1
- perl-list-moreutils-xs=0.428=pl526_0
- perl-pathtools=3.75=pl526h1de35cc_1
- perl-scalar-list-utils=1.52=pl526h01d97ff_0
- perl-threaded=5.26.0=0
- perl-types-serialiser=1.0=pl526_2
- perl-xsloader=0.24=pl526_0
- pip=21.0.1=pyhd8ed1ab_0
- pixman=0.38.0=h01d97ff_1003
- popt=1.16=1
- python=3.7.10=h7728216_100_cpython
- python_abi=3.7=1_cp37m
- qt=5.9.7=h93ee506_2
- readline=8.0=h0678c8f_2
- rsync=3.2.3=h71e35cd_1
- setuptools=49.6.0=py37hf985489_3
- spades=3.15.0=he641558_0
- sqlite=3.34.0=h17101e1_0
- tar=1.34=hbb58dfb_0
- tbb=2020.2=h940c156_4
- tk=8.6.10=h0419947_1
- wget=1.20.1=h33e2efd_0
- wheel=0.36.2=pyhd3deb0d_0
- xxhash=0.8.0=h35c211d_3
- xz=5.2.5=haf1e3a3_1
- zlib=1.2.11=h7795811_1010
- zstd=1.4.9=h582d3a0_0
- pip:
- appdirs==1.4.4
- attrs==21.2.0
- chardet==4.0.0
- coverage==5.5
- cycler==0.11.0
- htseq==0.13.5
- idna==2.10
- importlib-metadata==4.8.1
- iniconfig==1.1.1
- joblib==1.0.1
- kiwisolver==1.3.2
- mappy==2.22
- matplotlib==3.4.3
- more-itertools==8.9.0
- ncbi-genome-download==0.3.0
- packaging==21.0
- pandas==1.2.3
- pillow==8.4.0
- pluggy==0.13.1
- py==1.10.0
- pyparsing==2.4.7
- pysam==0.16.0.1
- pytest==5.4.3
- pytest-cov==2.12.1
- pytest-notimplemented==1.0.0
- python-dateutil==2.8.1
- pytz==2021.1
- requests==2.25.1
- scikit-learn==0.24.1
- scipy==1.6.2
- six==1.15.0
- sklearn==0.0
- threadpoolctl==2.1.0
- toml==0.10.2
- tqdm==4.59.0
- typing-extensions==3.10.0.2
- urllib3==1.26.4
- wcwidth==0.2.5
- zipp==3.5.0
prefix: /opt/anaconda3/envs/enrichseq