From e58a54ce81de23f10cc14dcedda6625f10c62614 Mon Sep 17 00:00:00 2001
From: Sandy Rogers <sandyr@ebi.ac.uk>
Date: Tue, 12 Mar 2024 11:11:48 +0000
Subject: [PATCH] fix "Search for Samples or Studies" R notebook: sparse df
 merge

---
 src/notebooks/R Examples/Search for Samples or Studies.ipynb | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/src/notebooks/R Examples/Search for Samples or Studies.ipynb b/src/notebooks/R Examples/Search for Samples or Studies.ipynb
index 4a5c7eb..90769fc 100644
--- a/src/notebooks/R Examples/Search for Samples or Studies.ipynb	
+++ b/src/notebooks/R Examples/Search for Samples or Studies.ipynb	
@@ -88,6 +88,7 @@
    },
    "outputs": [],
    "source": [
+    "library(dplyr)\n",
     "library(vegan)\n",
     "library(ggplot2)\n",
     "library(phyloseq)\n",
@@ -151,7 +152,7 @@
    "source": [
     "samps_np <- mgnify_query(mg, \"samples\", latitude_gte=88, maxhits=1)\n",
     "samps_sp <- mgnify_query(mg, \"samples\", latitude_lte=-88, maxhits=1)\n",
-    "samps_polar <- rbind(samps_np, samps_sp)"
+    "samps_polar <- bind_rows(samps_np, samps_sp)"
    ]
   },
   {