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PDSfun function error #1

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ghaithcode opened this issue May 15, 2019 · 1 comment
Open

PDSfun function error #1

ghaithcode opened this issue May 15, 2019 · 1 comment

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@ghaithcode
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Hello,

Loaddata(file="./Data/DuplMetabolomics_clean.csv")
Metabolite_pathway_table=MetaTOpathway('name')
PDSmatrix= PDSfun(Metabolite_pathway_table)

Loading required package: pathifier
robust_score_bydist. min_exp= 0 , min_std= 0
Error in quantify_pathways_deregulation(as.matrix(newData), row.names(newData), :
invalid dimentions
Calls: PDSfun -> quantify_pathways_deregulation

If you can assist with the reason behind this error and how can I solve it?

Thanks,

@YYCAT1998
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Hi,

Have you solved this problem? I'm facing this now.

Thanks!

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