diff --git a/src/models/JOS3.js b/src/models/JOS3.js index 5d8d1ed..6ab1f97 100644 --- a/src/models/JOS3.js +++ b/src/models/JOS3.js @@ -40,6 +40,7 @@ import { local_q_work } from "../jos3_functions/thermoregulation/local_q_work.js import { cr_ms_fat_blood_flow } from "../jos3_functions/thermoregulation/cr_ms_fat_blood_flow.js"; import { resp_heat_loss } from "../jos3_functions/thermoregulation/resp_heat_loss.js"; import { sum_bf } from "../jos3_functions/thermoregulation/sum_bf.js"; +import Object from "lodash/object.js"; /** * Create an array of shape (17,) with the given input. @@ -522,7 +523,12 @@ export class JOS3 { q_thermogenesis_muscle, q_thermogenesis_fat, q_thermogenesis_skin, - } = sum_m(q_bmr_local, q_work, q_shiv, q_nst); + } = sum_m( + q_bmr_local.map((c) => c.clone()), + q_work, + q_shiv, + q_nst, + ); let q_thermogenesis_total = math.sum(q_thermogenesis_core) + @@ -845,7 +851,60 @@ export class JOS3 { * @returns {object} */ dict_results() { - throw new Error("Not implemented"); + if (!this._history || this._history.length === 0) { + console.log("The model has no data."); + return null; + } + + const checkWordContain = (word, ...args) => { + return args.some((arg) => word.includes(arg)); + }; + + let key2keys = {}; // Column keys + for (let [key, value] of Object.entries(this._history[0])) { + let keys; + if (value.length !== undefined) { + if (typeof value === "string") { + keys = [key]; // string is iter. Convert to list without suffix + } else if (checkWordContain(key, "sve", "sfv", "superficialvein")) { + keys = VINDEX["sfvein"].map((i) => `${key}_${BODY_NAMES[i]}`); + } else if (checkWordContain(key, "ms", "muscle")) { + keys = VINDEX["muscle"].map((i) => `${key}_${BODY_NAMES[i]}`); + } else if (checkWordContain(key, "fat")) { + keys = VINDEX["fat"].map((i) => `${key}_${BODY_NAMES[i]}`); + } else if (value.length === 17) { + keys = BODY_NAMES.map((bn) => `${key}_${bn}`); + } else { + keys = Array.from( + { length: value.length }, + (_, i) => `${key}_${BODY_NAMES[i]}`, + ); + } + } else { + keys = [key]; + } + + key2keys[key] = keys; + } + + let data = this._history.map((dictout) => { + let row = {}; + for (let [key, value] of Object.entries(dictout)) { + let keys = key2keys[key]; + let values = keys.length === 1 ? [value] : value; + keys.forEach((k, i) => { + row[k] = values[i]; + }); + } + return row; + }); + + let outDict = {}; + Object.keys(data[0]).forEach((key) => { + outDict[key] = data.map((row) => row[key]); + }); + + return outDict; } /** diff --git a/tests/models/1_run_dict.json b/tests/models/1_run_dict.json new file mode 100644 index 0000000..a079010 --- /dev/null +++ b/tests/models/1_run_dict.json @@ -0,0 +1,1730 @@ +{ + "cycle_time": [ + 0 + ], + "simulation_time": [ + 0 + ], + "dt": [ + 60000 + ], + "t_skin_mean": [ + 34.46418466255792 + ], + "t_skin_head": [ + 34.98583652881713 + ], + "t_skin_neck": [ + 35.10668504573099 + ], + "t_skin_chest": [ + 34.61642143810777 + ], + "t_skin_back": [ + 34.52453966623942 + ], + "t_skin_pelvis": [ + 35.844809578238284 + ], + "t_skin_left_shoulder": [ + 34.25228779730484 + ], + "t_skin_left_arm": [ + 33.857087457104285 + ], + "t_skin_left_hand": [ + 34.308156507844046 + ], + "t_skin_right_shoulder": [ + 34.2522877973049 + ], + 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for (const [key, value] of Object.entries(single_iteration)) { + it(key, () => { + const res = results[key]; + expect(res).not.toBeUndefined(); + + const ex = value[0]; + const ac = res[0]; + + switch (typeof ex) { + case "string": + expect(ac).toBe(ex); + break; + default: + expect(ac).toBeCloseTo(ex, 10); + } + }); + } }); }); + + describe("state after 20 iterations", () => { + describe("results should have correct values", () => { + const jos = new JOS3( + undefined, + undefined, + undefined, + undefined, + undefined, + undefined, + undefined, + undefined, + "all", + ); + + jos.simulate(20); + + const results = jos.dict_results(); + for (const [key, value] of Object.entries(twenty_iterations)) { + it(key, () => { + const res = results[key]; + expect(res).not.toBeUndefined(); + + + for (let i = 0; i < value.length; i++) { + const ex = value[i]; + const ac = res[i]; + + switch (typeof ex) { + case "string": + expect(ac).toBe(ex); + break; + default: + expect(ac).toBeCloseTo(ex, 10); + } + } + }); + } + }); + }) });