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[BUG]image margin with no DAPI detected huge amounts of cells when croped to predict using cellpose2 #1090

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rmd13 opened this issue Jan 17, 2025 · 0 comments
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rmd13 commented Jan 17, 2025

Describe the bug
I cropped the images into small tiles. Some tiles are close to the corner and have no DAPI but only extreme background patches.
For this tile, I found that it predict hundreds of "cells".
For some other marginal tiles, once there is even a single DAPI spot present, it predict correctly of that DAPI.
So the problem only take place when there is absolute no DAPI in the tiles.

Is there a way to solve this problem?

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@rmd13 rmd13 added the bug Something isn't working label Jan 17, 2025
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