docker_compose_build.yml

name: Docker Compose Test

on: push

jobs:
  test:
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v2
      - name: Build the stack
        run: |
          cd deployment
          docker-compose up -d

      - uses: jakejarvis/wait-action@master
        with:
          time: "60"

      - name: Check running containers
        run: |
          cd deployment
          docker-compose logs

      # TODO It would be nice to upload an example report as a test
      - name: Run MegaQC Help
        run: docker exec deployment_megaqc_1 megaqc --help