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Function load_gcfs should be replaced with new independent functions from genomics.py.
replace load_gcfs function with independent steps
Step 1: load all strains
Step 2: load all bgcs
Step 3: load all gcfs
Step 4: connect bgc to strain with map_strain_to_bgc
Step 5: connect gcf to bgcs with map_bgc_to_gcf
Step 6: filter_mibig_only_gcf
Step 7: get clean gcfs, bgcs and strains with get_bgcs_from_gcfs and get_strains_from_bgcs
The text was updated successfully, but these errors were encountered:
Function load_gcfs should be replaced with new independent functions from
genomics.py
.Step 1: load all strains
Step 2: load all bgcs
Step 3: load all gcfs
Step 4: connect bgc to strain with
map_strain_to_bgc
Step 5: connect gcf to bgcs with
map_bgc_to_gcf
Step 6:
filter_mibig_only_gcf
Step 7: get clean gcfs, bgcs and strains with
get_bgcs_from_gcfs
andget_strains_from_bgcs
The text was updated successfully, but these errors were encountered: