diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index e9739a9c..ff12ad1a 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -3,6 +3,8 @@ name : tests on: push: pull_request: + schedule: + - cron: '00 4 * * *' # daily at 4AM jobs: build: @@ -22,7 +24,11 @@ jobs: uses: supercharge/mongodb-github-action@1.6.0 - name: start Sirepo-Bluesky container - run: bash scripts/start_docker.sh -d + run: | + set -vxeuo pipefail + . scripts/start_docker.sh -d + export SIREPO_DOCKER_CONTAINER_ID + echo "SIREPO_DOCKER_CONTAINER_ID=${SIREPO_DOCKER_CONTAINER_ID}" >> $GITHUB_ENV - name: is Sirepo-Bluesky running? run: docker ps -a @@ -32,11 +38,6 @@ jobs: with: python-version: ${{ matrix.python-version }} - #- name: Add conda to system path - #run: | - # $CONDA is an environment variable pointing to the root of the miniconda directory - #echo $CONDA/bin >> $GITHUB_PATH - - name: Create conda environment run: | # For reference: https://www.gnu.org/software/bash/manual/html_node/The-Set-Builtin.html. @@ -65,4 +66,10 @@ jobs: set -vxeuo pipefail source $CONDA/etc/profile.d/conda.sh conda activate test - pytest -s -v sirepo_bluesky/tests + pytest -s -vv sirepo_bluesky/tests + status=$? + echo "Sirepo Docker container id: ${SIREPO_DOCKER_CONTAINER_ID}" + docker logs ${SIREPO_DOCKER_CONTAINER_ID} + if [ $status -gt 0 ]; then + exit $status + fi diff --git a/scripts/start_docker.sh b/scripts/start_docker.sh index b8c873fb..f423dd1e 100644 --- a/scripts/start_docker.sh +++ b/scripts/start_docker.sh @@ -1,5 +1,19 @@ #!/bin/bash +# set -vxeuo pipefail + +error_msg="Specify '-it' or '-d' on the command line as a first argument." + +if [ -z "$1" ]; then + echo "${error_msg}" + exit 1 +elif [ "$1" != "-it" -a "$1" != "-d" ]; then + echo "${error_msg} Specified argument: ${1}" + exit 2 +fi + +unset cmd _cmd docker_image SIREPO_DOCKER_CONTAINER_ID + month=$(date +"%m") day=$(date +"%d") year=$(date +"%Y") @@ -8,26 +22,36 @@ today="${HOME}/tmp/data/${year}/${month}/${day}" docker_image="radiasoft/sirepo:beta" -if [ -d "${today}" ] -then +if [ -d "${today}" ]; then echo "Directory ${today} exists." else echo "Creating Directory ${today}" mkdir -p "${today}" fi -ls -l $HOME/tmp +# ls -l $HOME/tmp docker pull ${docker_image} docker images -# specify -it or -d on the command line -docker run $1 --init --rm --name sirepo \ +in_docker_cmd="mkdir -v -p /sirepo/ && cp -Rv /SIREPO_SRDB_ROOT/* /sirepo/ && sirepo service http" +cmd="docker run $1 --init --rm --name sirepo \ -e SIREPO_AUTH_METHODS=bluesky:guest \ -e SIREPO_AUTH_BLUESKY_SECRET=bluesky \ -e SIREPO_SRDB_ROOT=/sirepo \ -e SIREPO_COOKIE_IS_SECURE=false \ -p 8000:8000 \ -v $PWD/sirepo_bluesky/tests/SIREPO_SRDB_ROOT:/SIREPO_SRDB_ROOT:ro,z \ - ${docker_image} bash -l -c "mkdir -v -p /sirepo/ && cp -Rv /SIREPO_SRDB_ROOT/* /sirepo/ && sirepo service http" + ${docker_image} bash -l -c \"${in_docker_cmd}\"" + +echo -e "Command to run:\n\n${cmd}\n" +if [ "$1" == "-d" ]; then + SIREPO_DOCKER_CONTAINER_ID=$(eval ${cmd}) + export SIREPO_DOCKER_CONTAINER_ID + echo "Container ID: ${SIREPO_DOCKER_CONTAINER_ID}" + docker ps -a + docker logs ${SIREPO_DOCKER_CONTAINER_ID} +else + eval ${cmd} +fi diff --git a/sirepo_bluesky/sirepo_flyer.py b/sirepo_bluesky/sirepo_flyer.py index e7ee59fa..1ef3740e 100644 --- a/sirepo_bluesky/sirepo_flyer.py +++ b/sirepo_bluesky/sirepo_flyer.py @@ -217,7 +217,9 @@ def kickoff(self): for i in range(len(self.params_to_change)): # name doesn't need to be unique, server will rename it c1 = sb.copy_sim('{} Bluesky'.format(sb.data['models']['simulation']['name']), ) - print('copy {}, {}'.format(c1.sim_id, c1.data['models']['simulation']['name'])) + print('copy {} -> {}, {}'.format(sb.data['models']['simulation']['simulationId'], + c1.sim_id, + c1.data['models']['simulation']['name'])) for key, parameters_to_update in self.params_to_change[i].items(): optic_id = sb.find_optic_id_by_name(key) diff --git 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b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/rs4pi/lib/.placeholder similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/rs4pi/lib/.placeholder rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/rs4pi/lib/.placeholder diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/00000001/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/00000001/sirepo-data.json similarity index 99% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/00000001/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/00000001/sirepo-data.json index d158002c..5ea9d29e 100644 --- a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/00000001/sirepo-data.json +++ b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/00000001/sirepo-data.json @@ -123,7 +123,7 @@ "name": "basic (from SRW)", "notes": "", "npoint": 100000, - "simulationId": "0jcPUrn9", + "simulationId": "00000001", "simulationSerial": 1629134267786670, "sourceType": "geometricSource" }, diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/2oc4qGgg/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/2oc4qGgg/sirepo-data.json similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/2oc4qGgg/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/2oc4qGgg/sirepo-data.json diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/3GugjSu6/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/3GugjSu6/sirepo-data.json similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/3GugjSu6/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/3GugjSu6/sirepo-data.json diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/98kb3SXy/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/98kb3SXy/sirepo-data.json similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/98kb3SXy/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/98kb3SXy/sirepo-data.json diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/BuXkflTm/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/BuXkflTm/sirepo-data.json similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/BuXkflTm/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/BuXkflTm/sirepo-data.json diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/dbqIlTWL/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/dbqIlTWL/sirepo-data.json similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/dbqIlTWL/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/dbqIlTWL/sirepo-data.json diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/dybDduXC/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/dybDduXC/sirepo-data.json similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/dybDduXC/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/dybDduXC/sirepo-data.json diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/jBqgPdn3/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/jBqgPdn3/sirepo-data.json similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/jBqgPdn3/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/jBqgPdn3/sirepo-data.json diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/lib/.placeholder b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/lib/.placeholder similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/lib/.placeholder rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/lib/.placeholder diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/uO8RxQLa/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/uO8RxQLa/sirepo-data.json similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/uO8RxQLa/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/uO8RxQLa/sirepo-data.json diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/vPwfF2la/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/vPwfF2la/sirepo-data.json similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/shadow/vPwfF2la/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/shadow/vPwfF2la/sirepo-data.json diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/silas/2C3l80os/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/silas/2C3l80os/sirepo-data.json similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/silas/2C3l80os/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/silas/2C3l80os/sirepo-data.json diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/silas/lib/.placeholder b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/silas/lib/.placeholder similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/silas/lib/.placeholder rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/silas/lib/.placeholder diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/srw/00000000/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/srw/00000000/sirepo-data.json similarity index 99% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/srw/00000000/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/srw/00000000/sirepo-data.json index 81fbbe60..a137fd3a 100644 --- a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/srw/00000000/sirepo-data.json +++ b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/srw/00000000/sirepo-data.json @@ -527,7 +527,7 @@ "photonEnergy": "4240", "sampleFactor": 1, "samplingMethod": 1, - "simulationId": "LFPH22wg", + "simulationId": "00000000", "simulationSerial": 1629134393894456, "sourceType": "u", "verticalPointCount": 100, diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/srw/00000001/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/srw/00000001/sirepo-data.json similarity index 99% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/srw/00000001/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/srw/00000001/sirepo-data.json index 20c5e8da..19e92359 100644 --- a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/srw/00000001/sirepo-data.json +++ b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/srw/00000001/sirepo-data.json @@ -393,7 +393,7 @@ "photonEnergy": "9000", "sampleFactor": 1, "samplingMethod": 1, - "simulationId": "jUhMGDzv", + "simulationId": "00000001", "simulationSerial": 1629134295111526, "sourceType": "g", "verticalPointCount": 100, diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/srw/4XRca1pe/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/srw/4XRca1pe/sirepo-data.json similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/srw/4XRca1pe/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/srw/4XRca1pe/sirepo-data.json diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/srw/5eignbOG/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/srw/5eignbOG/sirepo-data.json similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/srw/5eignbOG/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/srw/5eignbOG/sirepo-data.json diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/srw/5gfHggOS/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/srw/5gfHggOS/sirepo-data.json similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/srw/5gfHggOS/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/srw/5gfHggOS/sirepo-data.json diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/srw/6goeSdTO/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/srw/6goeSdTO/sirepo-data.json similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/srw/6goeSdTO/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/srw/6goeSdTO/sirepo-data.json diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/srw/7BMrabs4/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/srw/7BMrabs4/sirepo-data.json similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/srw/7BMrabs4/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/srw/7BMrabs4/sirepo-data.json diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/srw/8J4F6O4s/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/srw/8J4F6O4s/sirepo-data.json similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/srw/8J4F6O4s/sirepo-data.json rename to 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sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/zgoubi/z7V7tECo/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/zgoubi/z7V7tECo/sirepo-data.json diff --git a/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/zgoubi/zlOlddMs/sirepo-data.json b/sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/zgoubi/zlOlddMs/sirepo-data.json similarity index 100% rename from sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/r5HV25DG/zgoubi/zlOlddMs/sirepo-data.json rename to sirepo_bluesky/tests/SIREPO_SRDB_ROOT/user/testuser/zgoubi/zlOlddMs/sirepo-data.json