_bookdown.yml

--- 
title: "Neotoma Paleoecology Manual v2.0"
author: "Simon Goring"
date: "`r Sys.Date()`"
site: bookdown::bookdown_site
rmd_files: ["index.Rmd", 
            "chapters/01-neotoma_introduction.Rmd",
            "chapters/working_with_db.md",
            "chapters/startingR.md",
            "chapters/RSiteSearch.md",
            "chapters/sql_quickly.Rmd",
            "chapters/db_design_concepts.Rmd",
            "chapters/tables/neotoma_tables.Rmd",
            "chapters/tables/tables_contacts.Rmd",
            "chapters/tables/tables_dataset.Rmd",
            "chapters/tables/tables_publications.Rmd",
            "chapters/tables/tables_samples.Rmd",
            "chapters/tables/tables_site.Rmd",
            "chapters/tables/tables_taxa.Rmd",
            "chapters/tables/tables_chron.Rmd",
            "chapters/references_cited.rst.md"]
output:
  bookdown::gitbook: default
documentclass: book
css: ./style.css
bibliography: "assets/references.bib"
biblio-style: apalike
link-citations: yes
delete_merged_file: true
---