diff --git a/README.md b/README.md index 04d70ac7..70956c70 100644 --- a/README.md +++ b/README.md @@ -265,6 +265,15 @@ specified in the `.gitmodules`. By freezing into the top-level dataset instead, authors do not need to host a modified version of `///reporonim/containers`. +### Fixup datalad config + +The version of mriqc we are using does not have an option `--no-datalad-get` which is hardcoded +into mriqc config, so we should remove it. + +```bash +datalad run -m "Remove ad-hoc option for mriqc for older frozen version" sed -i -e 's, --no-datalad-get,,g' .datalad/config +``` + ### Running the Containers When we run the bids-mriqc container, it will need a working directory