Release History

1.6.1

Explicitly declare requests >= 2.22.0 and urllib3 >= 1.25.2 as dependencies, which fixes an edge case causing the lims.versions and lims.current_minor_version properties to raise an exception on early versions of Python 3.6.

1.6.0

(#60) Added support for Python 3.12.
(#55) Step placements can now be updated without having to clear existing placements first.
(#53) Fix an issue that prevented StepRunner.add_default_reagents() from working correctly on Clarity 6.1+ if the step being run contains an archived reagent kit.
(#51) Fix an issue that could cause log messages to become duplicated, or disappear, when s4-clarity-lib is being used in tandem with an LLTK/LITK on the same step in Clarity 6.0+.
(#51) Added lims.versions and lims.current_minor_version properties.

1.5.0

(#45) Added the permitted_containers property to StepConfiguration.
(#43) Added support for the Step Setup state to StepRunner.
(#42) Improved Documentation, testing and function naming around container types and well ordering.

1.4.2

Migrated CI/CD from Travis-CI to GitHub Actions.
No code changes since 1.4.1, just pushing a release to verify that we can still deploy to PyPi!

1.4.1

(#40) Fixed a typo that prevented the supplier property from being set on an instance of ReagentKit.

1.4.0

(#34) Now fully compatible with Python 3.10.
(#35) The insecure and dry-run parameters may now be used together when creating a LIMS object.

1.3.1

(#33) Fixed regression in 1.3.0 which caused all stage-based routing to fail

1.3.0

(#25) Added support for the Clarity Instruments API endpoint:
- Added a new Instrument class
- Updated StepConfiguration (in configuration.protcol) and StepDetails (in step) to retrieve instrument related xml subnodes
(#24) Add a files property to the Project class
(#30) Fixed workflow.enqueue() setting stage-uri in generated XML if stage appears in the domain name
(#28) Removed dependency on typing for Python versions 3.5 and up
Updated documentation:
- (#27) The StepProgramStatus class documentation now more accurately reflects usage
- (#29) The documentation of the Stage class has corrected to show that the step property returns a StepConfiguration object

1.2.0

Fix ClarityElement.__repr__ to always return a string to avoid exceptions in Python 3.x
Fix incorrect universal tag for ControlType that prevented the creation of Control Types using the library
Add is_published property to the File object

1.1.1

Remove timeout from wait_for_epp

1.1.0

Add suport for Clarity 5 demux endpoint
Add support for timeouts on Clarity HTTP requests

1.0.0

s4.scripting -> s4.clarity.scripts
s4.steputils -> s4.clarity.steputils
s4.utils -> s4.clarity.utils
Removed s4.bartender
Removed s4.packager
Removed s4.clarity.monitor

0.3.0

Python 3 internal