A python based webapplication to read vcf dataset built on TileDBVCF technology
Following python packages are needed to run the code:
- python ==3.10.13
- streamlit ==1.29.0
- tiledbvcf ==0.27.1
- pandas ==2.1.4
- anaconda
- conda create --name environment_name python=3.10
- pip install streamlit
- conda install -c conda-forge -c bioconda -c tiledb tiledbvcf-py
- Alter the path for the metadata and the tiledbvcf dataset file in the code and save it
- On the terminal use streamlit run main.py to run the code
If everything goes well you should see the output as in the figure below:
