.travis.yml

language: r
#sudo: required

# R version
r: bioc-devel

# Package caching only makes sense for the release versions.
#cache: packages

# Packages from Bioconductor needed
#bioc_required: true

# Be strict when checking package
warnings_are_errors: true

r_build_args: "--no-manual --no-resave-data --keep-empty-dirs"
r_check_args: "--no-build-vignettes --no-manual --timings"

# Package dependencies installed using apt-get
addons:
  apt:
    packages:
      - gsl-bin
      - libgsl-dev
 
#      - gsl-bin
      
#      - libgsl0-dev
#      - libgsl0ldbl

#r_github_packages:
#   - Bioconductor-mirror/BiocStyle

bioc_packages:
  - BiocStyle
  - BiocCheck
# Package dependencies from CRAN not in DESCRIPTION file
#r_binary_packages:
#   - covr
   
r_packages:
  - covr
  
# To compile C++ code
before_script:
  - Rscript -e 'library(Rcpp); Rcpp::compileAttributes()'

# To send info to codecov
after_success:
  - Rscript -e 'library(covr); codecov()'