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Describe the bug
Pandas has many transient dependencies that are really unnecessary for our use case.
This is particularly important when using cubi_tk as a library from other code.
We should get rid of it as a dependency as it is used in few places only anyway or provide a cubi-tk-minimal version similar to how snakemake does it that disables some features but is independent of pandas.
The text was updated successfully, but these errors were encountered:
The impact on cubi-tk annotate would be minimal. I will take care of
removing it from there completely.
Manuel Holtgrewe <notifications@github.com> schrieb am Fr., 12. Feb. 2021,
15:06:
*Describe the bug*
Pandas has many transient dependencies that are really unnecessary for our
use case.
This is particularly important when using cubi_tk as a library from other
code.
We should get rid of it as a dependency as it is used in few places only
anyway or provide a cubi-tk-minimal version similar to how snakemake does
it that disables some features but is independent of pandas.
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Describe the bug
Pandas has many transient dependencies that are really unnecessary for our use case.
This is particularly important when using
cubi_tk
as a library from other code.We should get rid of it as a dependency as it is used in few places only anyway or provide a
cubi-tk-minimal
version similar to how snakemake does it that disables some features but is independent of pandas.The text was updated successfully, but these errors were encountered: