pyproject.toml

[build-system]
requires = ["setuptools", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "sodar-cli"
description = "Command line interface client for SODAR REST API."
readme = "README.md"
requires-python = ">=3.9"
classifiers = [
    "Development Status :: 4 - Beta",
    "Intended Audience :: Developers",
    "License :: OSI Approved :: MIT License",
    "Natural Language :: English",
    "Topic :: Scientific/Engineering :: Bio-Informatics",
    "Programming Language :: Python :: 3",
]
dynamic = ["version"]
dependencies = [
    "attrs>=24.3.0",
    "cattrs>=24.1.2",
    "logzero>=1.7.0",
    "python-dateutil>=2.9.0.post0",
    "python-levenshtein>=0.26.1",
    "requests>=2.32.3",
    "simplejson>=3.19.3",
    "tabulate>=0.9.0",
    "toml>=0.10.2",
    "tqdm>=4.67.1",
]

[project.license]
file = "LICENSE"

[project.scripts]
sodar-cli = "sodar_cli.__main__:main"

[tool.setuptools.dynamic]
version = {attr = "sodar_cli.version.__version__"}


[tool.coverage.run]
omit = []
relative_files = true

[tool.coverage.report]
exclude_lines = ["pragma: no cover", "def __repr__", "if __name__ == '__main__':"]

[tool.ruff]
# Exclude a variety of commonly ignored directories.
exclude = [
    ".bzr",
    ".direnv",
    ".eggs",
    ".git",
    ".git-rewrite",
    ".hg",
    ".ipynb_checkpoints",
    ".mypy_cache",
    ".nox",
    ".pants.d",
    ".pyenv",
    ".pytest_cache",
    ".pytype",
    ".ruff_cache",
    ".svn",
    ".tox",
    ".venv",
    ".vscode",
    "__pypackages__",
    "_build",
    "buck-out",
    "build",
    "dist",
    "node_modules",
    "site-packages",
    "venv",
]
line-length = 120
indent-width = 4

[tool.ruff.lint]
ignore = ["E203", "E266", "E501"]
select = ["B", "C", "E", "F", "W"]

[tool.ruff.lint.mccabe]
# Flag errors (`C901`) whenever the complexity level exceeds 18.
max-complexity = 18

[tool.pytest.ini_options]
addopts = [
    "--import-mode=importlib",
]

[dependency-groups]
dev = [
    "factory-boy==2.12.0",
    "pytest>=8.3.4",
    "requests-mock>=1.7.0",
    "ruff>=0.9.0",
]