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error when fasta header includes a ">" #4

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Cajac102 opened this issue Sep 9, 2024 · 0 comments
Open

error when fasta header includes a ">" #4

Cajac102 opened this issue Sep 9, 2024 · 0 comments

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@Cajac102
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Cajac102 commented Sep 9, 2024

Hello,

When running psortb on fastas that include a " >" in the fasta header (which does not sound like a good practice anyways, but is the case for some proteins downloaded from uniprot), psortb fails with the error "MSG: Got a sequence without letters. Could not guess alphabet". Removing the ">" fixes the issue.

Kind regards,
Caro

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