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DESCRIPTION
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Package: MouseAgingData
Title: Multi-omics data access for studies investigating the effects of
aging
Version: 1.3.0
Authors@R:
c(person("Tram", "Nguyen",
role = c("aut", "cre"),
email = "Tram_Nguyen@hms.harvard.edu",
comment = c(ORCID = "0000-0003-4809-6227")),
person("Kris", "Holton",
role = "aut"),
person("Tyrone", "Lee",
role = "aut"),
person("Nitesh", "Turaga",
role = "ctb"),
person("Ludwig", "Geistlinger",
role = "aut"),
person("Robert", "Gentleman",
role = "aut"))
Description: The MouseAgingData package provides analysis-ready data
resources from different studies focused on aging and rejuvenation in
mice. The package currently provides two 10x Genomics single-cell RNA-seq
datasets. The first study profiled the aging mouse brain measured across
37,089 cells (Ximerakis et al., 2019). The second study investigated
parabiosis by profiling a total of 105,329 cells (Ximerakis & Holton et al., 2023).
The datasets are provided as SingleCellExperiment objects and provide raw
UMI counts and cell metadata.
License: Artistic-2.0
URL: https://github.com/ccb-hms/MouseAgingData
BugReports: https://github.com/ccb-hms/MouseAgingData/issues
Depends:
R (>= 4.4.0),
SingleCellExperiment
Imports:
AnnotationHub,
ExperimentHub
Suggests:
BiocStyle,
knitr,
rmarkdown,
scater
VignetteBuilder:
knitr
biocViews: ExperimentData, ExpressionData, SequencingData, RNASeqData,
SingleCellData, ExperimentHub, PackageTypeData, Mus_musculus_Data
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1