DESCRIPTION

Package: BSA
Title: Conduct c.neoformans BSA analysis
Version: 1.1.0
Authors@R: 
    c(person("Daniel", "Agustihno", , "daniel.paivaagustinho@bcm.edu", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0003-2242-4798")),
    person("Chase", "Mateusiak", , "chasem@wustl.edu", role = c("aut"),
           comment = c(ORCID = "0000-0002-2890-4242")))
Description: This is a refactored version of the routines used to analyze 
  the c.neoformans BSA study data
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
URL: https://github.com/cmatKhan/BSA,
    https://cmatkhan.github.io/BSA/
BugReports: https://github.com/cmatKhan/BSA/issues
Imports: 
    dplyr (>= 1.0.9),
    futile.logger (>= 1.4.3),
    locfit (>= 1.5.9.6),
    magrittr,
    modeest (>= 2.4.0),
    purrr (>= 0.3.4),
    QTLseqr (>= 0.7.5.2),
    rlang (>= 1.0.6),
    SeqArray (>= 1.36.2),
    SeqVarTools (>= 1.34.0),
    stringr (>= 1.4.0),
    tidyr (>= 1.2.0),
    VariantExperiment (>= 1.10.0)
Remotes: 
    bmansfeld/QTLseqr
Suggests: 
    BSgenome.CneoformansVarGrubiiKN99.NCBI.ASM221672v1 (>= 1.0.0),
    foreach (>= 1.5.2),
    GenomicRanges (>= 1.48.0),
    ggrepel (>= 0.9.1),
    iterators (>= 1.0.14),
    knitr (>= 1.41),
    rmarkdown (>= 2.18),
    testthat (>= 3.1.5),
    tibble (>= 3.1.8),
    tidyverse (>= 1.3.2)
VignetteBuilder: knitr
Depends: 
    R (>= 2.10)
LazyData: true