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We discuss software infrastructure for databank operations of the c-VEDA project.

Recruitment and acquisition centres

The databank team will collect, curate, and publish data from the following recruitment and acquisition centres:

ID	CENTRE	Site	Location	MRI
11	CHANDIGARH	Postgraduate Institute of Medical Education & Research	Chandigarh, Punjab	Siemens Verio
12	MANIPUR	Regional Institute of Medical Sciences	Imphal, Manipur	—
13	KOLKATA	Regonal Occupational Health Centre (Eastern), Indian Council of Medical Research	Kolkata, West Bengal	—
14	RISHIVALLEY	Rishi Valley Rural Health Centre	Rishy Valley, Andhra Pradesh	—
15	MYSURU	CSI Holdsworth Memorial Hospital (MRI at JSS Hospital)	Mysuru, Karnataka	Philips Ingenia
16	NIMHANS	NIMHANS	Bengaluru, Karnataka	Siemens Skyra
17	SJRI	St. John's Research Institute	Bengaluru, Karnataka	—
18	MUMBAI	Centre for the Study of Social Change	Mumbai, Maharashtra	—

Acquisition centres collect clinical and environmental data using Psytools. The databank team download CSV files pseudonymized with PSC1 codes directly from the Delosis server.
Acquisition centres pseudonymize biological samples at the source using PSC1 codes. The c-VEDA biobank team collect samples and collate genetic data before sending them to the databank.
Acquisition centres anonymize DICOM files before sending them to the databank. Again subjects are identified by their PSC1 code only.

System software has been installed on the c-VEDA server as described in file /cveda/databank/framework/INSTALL.txt.

Application software has been deployed on the c-VEDA server under /cveda/databank/framework/cveda_databank:

cd /cveda/databank/framework
git clone https://github.com/cveda/cveda_databank.git

Databank operations, based on the above application software, are described in specific pages: