Strain | Class | Size (bp) | NCBI Accession Number | Reference |
---|---|---|---|---|
Acidobacterium capsulatum ATCC 51196 | Acidobacteria | 4,127,356 | NC_012483 | Ward et al., 2009 |
Aquifex aeolicus VF5 | Aquificae | 1,551,335 | NC_000918 | Deckert et al., 1998 |
Bacillus mycoides ATCC 6462 | Bacilli | 5,255,868 | NZ_CP009692 | Johnson et al., 2015 |
Bordetella pertussis 137 | Betaproteobacteria | 4,134,593 | NZ_CP010323 | Akamatsu et al., 2015 |
Chloroflexus aurantiacus J-10-fl | Chloroflexia | 5,258,541 | NC_010175 | Tang et al., 2011 |
Clostridium beijerinckii NCIMB 8052 | Clostridia | 6,000,632 | NC_009617 | Wang et al., 2012 |
Deinococcus radiodurans R1 | Deinococci | 3,060,986 | NC_001263, NC_001264 | White et al., 1999 |
Escherichia coli O26:H11 11368 | Gammaproteobacteria | 5,697,240 | NC_013361 | Ogura et al., 2009 |
Flavobacterium johnsoniae UW101 | Flavobacteriia | 6,096,872 | NC_009441 | McBride et al., 2009 |
Microcystis aeruginosa NIES-843 | Cyanobacteria | 5,842,795 | NC_010296 | Kaneko et al., 2007 |
Mycobacterium intracellulare ATCC 13950 | Actinobacteria | 5,402,402 | NC_016946 | Kim et al., 2012 |
Nostoc punctiforme PCC 73102 | Cyanobacteria | 8,234,322 | NC_010628 | Ekman et al., 2013 |
Pirellula staleyi DSM 6068 | Planctomycetia | 6,196,199 | NC_013720 | Clum et al., 2009 |
Rhizobium leguminosarum 3841 | Alphaproteobacteria | 5,057,142 | NC_008380 | Young et al., 2006 |
Shigella flexneri 2002017 | Gammaproteobacteria | 4,650,856 | NC_017328 | Ye et al., 2010 |
Simkania negevensis Z | Chlamydiae | 2,496,337 | NC_015713 | Collingro et al., 2011 |
Spirochaeta smaragdinae DSM 11293 | Spirochaetes | 4,653,970 | NC_014364 | Mavromatis et al., 2010 |
Staphylococcus xylosus HKUOPL8 | Bacilli | 2,836,901 | NZ_CP007208 | Ma et al., 2014 |
Streptococcus pneumoniae NT_110_58 | Bacilli | 2,287,774 | NZ_CP007593 | Hilty et al., 2014 |
Sulfolobus solfataricus SULA | Thermoprotei | 2,727,337 | NZ_CP011057 | McCarthy et al., 2015 |
Xyllela fastidiosa 9a5c | Gammaproteobacteria | 2,679,306 | NC_002488 | Simpson et al., 2000 |
Akamatsu MA, Nishiyama Jr MY, Morone M (2015) Whole-genome sequence of a Bordetella pertussis Brazilian vaccine strain. Genome Announc 3:e01570-14
Clum A, Tindall BJ, Sikorski J et al (2009) Complete genome sequence of Pirellula staleyi type strain (ATCC 27377). Stand Genomic Sci 1:308-316
Collingro A, Tischler P, Weinmaier T et al (2011) Unity in variety – the pan-genome of the Chlamydiae. Mol Biol Evol 28:3253-3270
Deckert G, Warren PV, Gaasterland T et al (1998) The complete genome of the hyperthermophilic bacterium Aquifex aeolicus. Nature 392:353-358
Ekman M, Picossi S, Campbell EL et al (2013) A Nostoc punctiforme sugar transporter necessary to establish a cyanobacterium-plant symbiosis. Plant Physiol 161:1984-1992
Hilty M, Wüthrich D, Salter SJ et al (2014) Global phylogenomic analysis of nonencapsulated Streptococus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages. Genome Biol Evol 6:3281-3294
Johnson SL, Daligault HE, Davenport KW et al (2015) Complete genome sequences for 35 biothreat assay-relevant species. Genome Announc 3:e00151-15
Kaneko T, Nakajima N, Okamoto S et al (2007) Complete genomic structure of the bloom-forming toxic cyanobacterium Microcystis aeruginosa NIES-843. DNA Res 14:247-256
Kim BJ, Choi BS, Lim JS et al (2012) Complete genome sequence of Mycobacterium intracellulare strain ATCC 13950. J Bacteriol 194:2750
Ma APY, Jiang J, Tun HM et al (2014) Complete genome sequence of Staphylococcus xylosus HKUOPL8, a potential oportunistic pathogen of mammals. Genome Announc 2:e00653-14
Mavromatis K, Yasawong M, Chertkov O et al (2010) Complete genome sequence of Spirochaeta smaragdinae type strain (SEBR 4228). Stand Genomic Sci 3:136-144
McBride MJ, Xie G, Martens EC et al (2009) Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis. Appl Environ Microbiol 75:6864-6875
McCarthy S, Gradnigo J, Johnson T et al (2015) Complete genome sequence of Sulfolobus solfataricus strain 98/2 and evolved derivatives. Genome Announc 3:e00549-15
Ogura Y, Ooka T, Iguchi A et al (2009) Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli. Proc Natl Acad Sci USA 106:17939-17944
Simpson AJG, Reinach FC, Arruda P et al (2000) The genome sequence of the plant pathogen Xyllela fastidiosa. Nature 406:151-159
Tang KH, Barry B, Chertkov O et al (2011) Complete genome sequence of the filamentous anoxygenic phototrophic bacterium Chloroflexus aurantiacus. BMC Genomics 12:334
Wang Y, Li X, Mao Y et al (2012) Genome-wide dynamic transcriptional profiling in Clostridium beijerinckii NCIMB 8052 using single-nucleotide resolution. BMC Genomics 13:102
Ward NL, Challacombe JF, Janssen PH et al (2009) Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils. Appl Environ Microbiol 75:2046-2056
White O, Elsen JA, Heidelberg JF et al (1999) Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1. Science 286:1571-1577
Ye C, Lan R, Xia S et al (2010) Emergence of a new multidrug-resistant serotype X variant in an epidemic clone of Shigella flexneri. J Clin Microbiol 48:419-426
Young JP, Crossman LC, Johnston AW et al (2006) The genome of Rhizobium leguminosarum has recognizable core and accessory components. Genome Biol 7:R34
The AnalyzedGenomes dataset is licensed under the Creative Commons Attribution-ShareAlike 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/4.0/.