aligned_sequences.mfa

>NC_000883.2 Human parvovirus B19, complete genome
-----------------------------------------------------ccaaatc
agatgccgccgg-------tcgccgccggtaggcgggacttccgg-------tacaagat
ggcggacaattacgtcatttcctgtgacgtcatttcctgtgacgtcacttccggtgggcg
ggacttccggaattagggttggctctgggccagcttgcttggggttgccttgacactaag
acaagcggcgcgccgcttgatcttagtggcacgtcaaccccaagcgc----tggcccaga
gccaaccctaattccggaagtcccgcccaccggaagtgac-----gtcacaggaaatgac
gtcacaggaaatgacgtaattgtccgccatcttgtaccggaagtcccgcctaccggcggc
gaccggcggcatctgatttggtgtcttcttttaaattttagcgggcttttttcccgcctt
atgcaaa-----------tgggcagccattttaagtgttttacta---------taattt
tattggtcagttttgtaacggttaaaatgggcggagcgtaggcggggactacagtatata
tagcacagcactgccgcagctctttctttctgggctgctttttcctggactttcttgct-
-------------------gttttttgtgagctaactaacaggtatttatactacttgtt
aatatactaacatggagctatttagaggggtgcttcaagtttcttctaatgttctggact
gtgctaacgataactggtggtgctctttactagatttagacacttctgactgggaaccac
taactcatactaacagactaatggcaatatacttaagcagtgtggcttctaagcttgacc
ttaccggggggccactagcagggtgct---tgtacttttttcaagcagaatgtaacaaat
ttgaagaa--------------------ggctatcatatt--catgtggttattgggggg
ccagggttaaaccccagaaacctcacagtgtgtgtagaggggttattt----aataatgt
actttatcactttgtaactgaaaatgtga-agctaaaatttttgccaggaatgactacaa
aaggcaaatactttagagatggagagcagtttatagaaaactatttaatgaaaaaaatac
ctttaaatgttgtatggtgtgttactaatattgatggatatatagatacctgtatttctg
ctacttttagaaggggagcttgccatgccaagaaaccccgcattaccacagccataa---
--atgatactagtagcgatgctggggagtctagcggcacaggggcagaggttgtgccatt
taatgggaagggaactaaggctagcataaagtttcaaactatggtaaactggttg-tgtg
aaaacagagtgtttacagaggataagtggaaactagttgactttaaccagtacactttac
taagcagtagtcacagtggaagttttca----------------aattcaaagtgcacta
aaactagcaatttataaagcaa---------------ctaatttagtgcctactagcaca
tttttattgcatacagactttgagcaggttatg--------tgtattaaagacaataaaa
ttgttaaattgttactttgtcaaaactatgaccccctattggtggggcagcatgtgttaa
agtggattgataaaaaatgtggcaagaaaaatacactgtggttttatgggccgccaagta
caggaaaaacaaacttggcaatggccattgctaaaagtgttccagtatatggcatggtta
actggaat------aatgaaaactttccatttaatgatgtagcaggaaaaagcttggtgg
tctgggatgaaggtattattaagtcta--------------caattgtagaagctgcaaa
agccattttaggcgggcaacccaccagggtagatcaaaaaatgcgtggaagtgtagctgt
gcctggagtacctgtggttataaccagcaatggtgacattacttttgttgtaagcgggaa
cactacaacaactgtacatgctaaagccttaaaagagcgcatggtaaagttaaactttac
tgtaagatgcagccctgacatggggttact------------------------------
----------aacagaggctgatgtacaacagtggcttac-----------atggtgtaa
tgcacaaagctgggaccactatgaaaactgggcaataaactacacttttgatttccctgg
aattaatgcagatgccctccacccagacctccaaaccaccccaattgtcacagacaccag
tatcagcagcagtggtggtgaaagctctgaagaactca----------------------
--gtgaaagcagcttttttaacctcatcaccccaggcgcctggaacactgaaaccccgcg
ctctagtacgcccatccccgggaccagttcaggagaatcatttgtcg--gaagcccagtt
tcctccgaagttgtagctgcatcgtgggaagaagccttctacacacctttggcagaccag
tttcgtgaactgttagttggggttgattatgtgtgggacggtgtaaggggtttacctgtg
tgttgtgtgcaacatattaacaatagtgggggaggcttgggactttgtccccattgcatt
aatgtaggggcttggtataatggatggaaatttcgagaattta-----ccccagatttgg
tgcgatgtagctgccatgtgggagcttctaatcccttttctgtgctaacctgcaaaaaat
gtgcttacctgtctggattgcaaagctttgtagattatgagtaaagaaagtggcaaatgg
tgggaaagtgatgatgaatttgctaaagctgtgtatcagcaatttgtggaattttatgaa
aaggttactggaacagact-tagagcttattcaaatattaaaagatcattataatatttc
tttagataatcccctagaaaacccatcctctctgtttgacttagttgctcgcattaaaaa
taaccttaaaaattctccagacttatatagtcatcattttcaaagtcatggacagttatc
tgaccacccccatgccttatcatccagtagcagtcatgcagaacctagaggagaagatgc
agtattatctagtgaagacttacacaagcctgggcaagttagcgta-caactacccggta
ctaactatgttgggcctggcaatgagctacaagctgggcccccgcaaagtgctgttgaca
gtgctgcaaggattcatgactttaggtatagccaactggctaagttgggaataaatccat
atactcattggactgtagcagatgaagagcttttaaaaaatataaaaaatgaaactgggt
ttcaagcacaagtagtaaaagactactttactttaaaaggtgcagctgcccctgtggc--
--------------------------------ccattttcaaggaagtttgccggaagtt
ccc----gcttacaacgcctcagaaaaatac----ccaagcatgacttcagttaattctg
c-----------------------------------------------------------
------------------------------------------------------------
---agaagccagcactggtgcaggaggggggggcagtaatcctgtcaaaagcatgtggag
tgagggggccacttttagtgccaa------------------------------------
--------------ctctgtgacttgtacattttctagacagtttttaattccatatgac
ccagagcaccattataaggtgttttctcccgcagcaagtagctgccacaatgccagtgga
aaggaggcaaaggtttgcaccattagtcccataatgggatactcaaccccatggagatat
ttagattttaatgctttaaacttatttttttcacctttagagtttcagcacttaattgaa
aattatg-----gaagtatagctcctgatgctttaactgtaaccatatcagaaattgctg
ttaaggatgttacagacaaaactggaggggg----------------ggtgcaggttact
gacagcactac-------agggcgcctatgcatgttagtagaccatgaatacaagtaccc
atatgtgttagggcaaggtcaagatactttagccc-----------cagaacttcctatt
tgggtatactttccccctcaatatgcttacttaacagtaggagatgttaacacacaagga
atttctggagacagcaaaaaattagcaagtgaagaatcagc-attttatgttttgga---
---------------------acacagttcttttcagcttttaggtacaggaggtacagc
aactatgtctt---------------ataagtttcctccagtgcccccagaaaatttaga
gggctgcagtcaacacttttatgagatgtacaatcccttatacggatcccgcttaggggt
tcctgacacattaggaggtgac-----------ccaaaatttagatctttaacacatgaa
gaccatgcaattcagccccaaaacttcatgccagggccactagtaa-actcagtgtctac
aaaggagggagacagctctaa--------------------tactggagc---------t
gggaaagccttaacaggccttagcaca-----------------------------ggta
cctctcaaaacactagaat-----atccttacgcccggggc-cagtgtctcagccgtacc
accactgggacacagataaatatgtcacaggaataaatgctatttctcatggtca---ga
ccacttatggtaacgctgaagacaaagagtatcagcaagg---agtgggtagatttccaa
atgaaaaagaacagctaaaacagttacagggt---------ttaaacatgcacac----c
tactttccc------------aataaaggaacccagcaatatacagatcaaattga----
------------------------gcgccccctaatggtgggttctgtatggaacagaag
agcccttcacta--------tgaaagccagctgtggagtaaaattccaaatttagatgac
agttttaaaactcagtttgcagccttaggaggatggggtttgcatcagccacctcct---
-caaatatttttaaaaatattacc--acaaagtgggccaattggagg----------tat
taaatcaatgggaattactaccttagttcagtatgccgtgggaattatgacagtaaccat
gacatttaaattggggccccgtaaagctacgggacggtggaatcctcaacctggagtata
tcccccgcacgcagcaggtcatttaccatatgtactatatgaccctacagctacagatgc
aaaacaacaccacagacatggatatgaaaagcctgaagaattgtggaca-------gcca
aaagccgtgtgcacccattgta-------aacactccccaccgtgccctcagccaggatg
cgtaactaaacgcccaccagtaccacccaga------------------ctgtacctgcc
ccctcctatac------ctataagacagcctaacacaaaagatatagacaatg-------
--------tagaattta--------------agtatttaac------------------c
agatatgaacaacatgttattagaatgttaagattgtgtaatatgtatcaaaatttagaa
aaataa--acgtttgt--tgtggttaaaaaattatgttgttgcgctttaaaaatttaaaa
gaagacaccaaatcagatgccgccggtcgccgccggtaggcgggacttccggtacaagat
ggcggaca----------attacgtcatttcctgtgacgtcatttcctgtgacgtcactt
ccggtg--------------------ggcggaacttccggaattagg-----gttggctc
tgggccagcgcttggggttgacgtgccactaagatcaagcggcgcgccgcttgtcttagt
gtcaaggcaacccc----------------------------------------------
----------aagcaagctggcccagagccaaccctaattccggaagtcccgcccaccgg
a-----------------agtgacgtcacaggaaatgacgtca---------caggaaat
gacgtaattgtccgccatcttgtaccggaagtcccgcctaccggcggcg-----------
----accggcggcatctgatttgg-
>NC_001539.1 Canine parvovirus, complete genome
attctttagaaccaactgaccaagttcacgtacgtatgacgtgatgacccg--ctgcgcg
cgctgcctacggcagtcacacgtcatacgtacgctccttggtcagttggttctaaagaat
gataggcggtttgtgtgtttaaacttg-----------------------------ggcg
ggaaaa-----------ggtgg--cgggctaattgtgggcgtggttaaaggtata-aaag
acaaac-catagaccgttactgacattcgcttcttgtctttga-------------caga
g---------------tgaacctctcttactctgactaaccaaccatgtctggcaaccag
tatactgaggaagttatggagg-----------------------gagtaaattggttaa
agaaacatgcagaaaatgaagcattttcgtttgtttttaaatgtgacaacgtccaactaa
atggaaaggatgttcgctggaacaactataccaaaccaattcaaaatgaagaactaacat
ctttaattagaggagcacaaacagcaatggatcaaaccgaag---------aagaagaaa
tggactgggaat--------------------------------cggaagttgatagtct
cgccaaaaagcaagtacaaacttttgatgcattaattaaaaaatgtctttttgaagtctt
tgtttctaaaaatatag--aaccaaatgaatgtgtttggtttattcaa-----catgaat
ggggaaaagatcaaggctggcatt----------gtcatgttttacttcatagtaagaac
ttacaacaagcaactggtaaatggctacgcagacaaatgaatatgtattggag-------
----tagatggttggtgactctttgttcggtaaacttaacaccaactgaaaagattaagc
tcagagaaattgcagaagatagtgaatgggtgactatattaacatacagacataagcaaa
caaaaa-----------------aagactatgttaaaatggttcattttggaaatatgat
agcatattactttttaacaaagaaaaaaa---------ttgtccaca----tgacaaaag
aaagtggctattttttaagtactgattctggttggaaatttaactttatgaagtatcaa-
--------------------------------gacagacaaattgtcagcacactttaca
ctg---------------------aacaaatgaaaccagaaaccgttgaaaccacagtga
cgacagcacaggaaacaaagcgcgggagaattcaaactaaaaaggaagtgtcaatcaaat
gtactttgcgggactt--ggttagtaaaagagtaacatcacctgaagactggatgatgtt
acaaccagatagttatattgaaatgatgg-----------cacaaccaggaggtgaaaat
cttttaaaaaatacacttgaaatttgtactttgactttagcaagaacaaaaacagcattt
gaattaatacttgaaaaagcagataatactaaactaactaactttgatcttgcaaattct
-----agaacatgtcaaatttttagaatgcacggatggaattggattaaagtt-------
-tgtcacgctatagcat----------------------------------gtgttttaa
---------atagacaaggtggtaaaagaaatacagttctttttcatggaccagcaagta
caggaaaatctatcattgctcaagccatagcacaag------ctgtgggtaatgttggtt
gttataatgcagcaaatgtaaattttccatttaatgactgtaccaataaaaatt---taa
tttggattgaagaagctggtaactttggtcaacaagttaatcaatt-----------taa
agcaatttgttctggacaaacaattagaattgatcaaaaaggtaaaggaagtaagcaaat
tgaaccaactccagtaattatgacaactaatgaaaatataacaattgtgagaattggatg
tgaagaaagacctgaacatacacaaccaataagagacagaatgttgaacattaagttagt
atgtaagcttccaggagactttggtttggttgataaagaagaatggcctttaatatgtgc
atggttagttaaacatggttatgaatcaaccatggctaactatacacatcattggggaaa
agtaccagaatgg------gatgaaaactgggcgg-------------------------
--------------------agcctaaaatacaagaaggtataaattcaccaggt-----
------------------tgcaaagacttagagacaca----agcggcaagcaatcctca
gagtcaagaccaagttctaactcctctgactccggacgtag--------tggaccttgca
ctggaa----------ccgtggagtactccagatacgcctattgcag--aaactgcaa--
--atcaacaatcaaaccaac----ttggcgttactcacaaagacgtgcaagcgagtccga
cgt--------------------------------ggtccgaaatagaggcagacctgag
agccatcttta----cttctgaacaat---------------------------------
--------------------tggaagaagattttcgagacga------cttggattaagg
tacgatggcacctcc---------------------------------------------
---------------------------------------ggcaaagagagcca-------
-ggagaggtaagggtgtgttagtaaagtg-------------------------------
--gggggaggggaaagatttaataacttaactaagtat---------------gtgtttt
tttataggactt------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------gtgcctccaggtt
ataaatatcttgggcctgggaacagtcttgaccaaggagaaccaactaacccttctgacg
ccgctgcaaaagaacacgacgaagcttacgctgcttatcttcgctctggtaaaaacccat
acttatatttctcgccagcagatcaacgctttatagatcaaactaaggacgctaaagatt
ggggggggaaaataggacattatttttttagagctaaaaaggcaattgctccagtatt--
----aactgatacaccagatcatccatcaacatcaagaccaa------------------
---------caaaaccaactaaaagaagtaaaccaccacctcatattttcatcaatcttg
caaaaaaaaaaaaagccggtgcaggacaagtaaaaagagacaatcttgcaccaatgagtg
atggagcagttcaaccagacggtggt--------caacctgctgtcagaaatgaaagagc
tacaggatctgggaacgggtctggaggcgggggtggtggtggttctgggggtgtggggat
ttctacgggtactttcaataatcagacggaatttaaatttttggaaaacggatgggtgga
aatcacagcaaactcaagcagacttgtaca--------------tttaaatatgccagaa
agtgaaaattatagaagagtggtt---------gtaaataatatggataaaactgcagtt
aacggaaacatggctttagatgatattcatgca---caaattgtaacaccttggtcattg
gttgatgcaaatgcttggggagtttggtttaatcc---aggagattggcaactaattgtt
aatactatgagtgagttgcatttagttagttttgaacaagaa--atttttaatgttgttt
taaagactgtttcagaatctgctact-------cagccaccaactaaagtttataataat
gatttaactgcatcattgatggttgcattagatagtaataatactatgccatttactcca
gcagctatgagatctgagacattgggtttttatccatggaaaccaaccataccaactcca
tggagatattattttcaatgggatagaacatta----------ataccatctcatactgg
-----------------------aactagtggcacaccaacaaatatataccatggt---
-------------acagatccaga---tgatgttcaattttatactattgaaaattctgt
gccagtacacttactaagaacaggtgatgaatttgctacag-------------------
----------gaacatttttttttgattgtaaaccatgtagactaacac---------at
acatggcaaacaaatagagcattgggcttaccaccatttctaaattctttgcctcaatct
gaaggagctactaactttggtga------------------tataggagttcaacaagat
aaaagacgtggtgtaactcaaatgggaaatacaaactatattactgaagctactattatg
agaccagctgaggttggttatagtgcaccatattattcttttgaggcgtctacacaaggg
ccatttaaaacacc-----------tattgcagcaggacgggggggagcgcaaacatatg
aaaatcaagcagcagatggtgatccaagatatgcatttggtagacaacatggtcaaaaaa
ctaccaca-----------acaggagaaacacctga-------gagatttacatatatag
cacatcaaga--tacaggaagatatccagaaggagattggattcaaaatat--------t
aactttaaccttcctgtaacgaatgataatgtattgctaccaacagatccaattggaggt
aaaacaggaattaactatactaatatatttaatacttatggtcctttaactgcattaaat
aatgtaccaccagtttatccaaatggtcaaatttgggataaagaatttgatactga----
---cttaaaaccaagacttcatgtaaatgcaccatttgtttgtcaaaataattgtcctgg
tcaattatttgtaaaagttgcgcctaatttaacaaatgaatatgatcctgatgcatctgc
taatatgtcaagaattg-taacttactcagatttttggtggaaa--ggtaaattagtatt
taaagctaaactaagagcctctcatact---------tggaatcca--------------
--------attcaacaaatga-----------------------------gtattaatgt
agataaccaatttaactatgtaccaagtaatattggaggtatgaaaattgtatatgaaaa
atctcaactagcacctagaaaattatattaacatacttactatggtttttatgtttatta
c--------atatcaactagcacctagaaaaattatattaatatacttactatggttttt
atgtttattacatattattttaagatta-attaaatacagcatagaaatattgtacttgt
atttgatataggatttagaagtttgttagatggtatacaataactgtaagaaatagaaga
acatttagatcatagttagtaggtttgtta------gatggtatacaataactgtaagaa
atagaagaacatttagatcatagttagtaggtttgttatatggtatacaataactgtaag
aaataga-------agaacatttagatcatagttagtagtttg----ttttataaaatgt
attgtaaaccattaatgtatgttgttatggtgtgggtggttggttggtttgcccttagaa
t--atgttaaggaccaaaaaaatcaataaaagacatttaaaactaaatggc-ctcgtata
ctgtctataaggtgaactaaccttaccataagtatcaatcgttgcgccctaatttaacaa
atgaatatgatcctgatgcatctgctaatatgtcaagaat-------tgtaacttactca
gatttttggtggaaaggtaaattagtatttaaagctaaactaagagcctctcatacttgg
aatccaattcaacaaatgagtattaatgtagataaccaatttaactatgtaccaagtaat
attggaggtat-gaaaattgtatatgaaaaatctcaactagc--------acctagaaaa
ttatattaacatctctaga------
>JX827169.1 Rat parvovirus NTU1, complete genome
------------------------------------------------------------
-------------------acgtcacaaacgtttcacatggttggttagttctaaaagat
gataagcggttcagggtttaaaccaaa-----------------------------ggcg
ggaaac------------------------cacagagggcgtggctaaatgtatataaag
acaagt-cagtgtcagttacactcactctatctttg---caga-------------caga
gatac-----------cggagctctttagc------------accatggcaggcaaccag
tattccgaggaagttctggatg-----------------------gagtcaattggttga
aagaccaatctgacacagaagcattctcctttgtttttaaatgtgagaatgtacaactga
atggtaaagatattaactggaacaactacaacaaacctctcaacaacgaggagctgactt
ctctcatcagaggggctgaaacagcaatggaccaggc---------------agaagata
tggaatgggaat--------------------------------ctgaacttgatcaact
caccaaaaagcaagtacaaatatttgatgctttggttaaaaaatgtctatttgaagtaat
acttaacaagaatgtag--cacctaatgactgtggttggtttatccaa-----catgaat
ggggaaaagatcaaggctggcact----------gtcatgtactgttgcacggcaaagga
ctgcaacaagcaatgggcaaatggttcagaaggcagatgaatgtactttggag-------
----cagatggttggtaactgcttgttcagttaacctttcaccagcagaaagaattaaac
tgagagaaattgtagaagacagtgaatgggtaacagtgcttacttatagacataaacaga
ccaaga-----------------aagattatgtgaaattggttcactttggaaacatgat
tgcctattacttcatgacaaaaaagaaaatagct--agttctcctc--------caagag
actctggctactttctcagcactgactctggctggaaatttaactttatgaaagaggca-
--------------------------------gacagacacttggtcagtacactttata
ctg---------------------atcaaatgaagccagaaacggttgagaccactgtaa
ccacagcacaggaaactaagcgcggcagaattcaaactaagaaggaggtgtcaatcaaat
gcacgctgcgcgacct--agtggccaaaagagttacttcaccggaagattggatgatgca
acagccagacagttacatagaaatgatgg-----------ctcaacctggtggagaaaac
ttgctgaaaaacactctagaaatttgtactctaactttggccagaacaaaaactgctttt
gatctaatacttgaaaaagcagaaccaagcaaactaactacttttgtacttggagacaca
-----cgcacatgtagaatttttgctggtcatggatggaactatattaaagtg-------
-tgtcatgccattgctt----------------------------------gtgtactga
---------acagacaaggaggcaaacgaaatacagtgctttttcatgggcctgccagca
caggaaaatcaattattgctcaagcaatagcacagg------cagttggtaatgttggtt
gctacaatgctgccaatgtgaactttccatttaatgactgtaccaacaaaaact---tga
tctgggttgaagaagctggtaattttggtcagcaagttaaccaatt-----------taa
agccatctgttcaggccagactatcagaattgaccaaaagggaaaaggcagcaaacagat
tgaaccaacaccggttataatgaccaccaatgaaaacataacagtggttagaattggatg
tgaagaaagacctgaacacacacaaccaatcagggatagaatgttgaatatccatcttac
caacacattgcctggtgactttggtttggttgaaaaacaagaatggcctttgatttgtgc
atggttagtgaggaatggttatcaatcaaccatggcaagttactctcatcactggggcaa
agtgcctgactgg------tcggagaactgggcgg-------------------------
--------------------agccagcgatgcaaacgcctataaattcaataggt-----
------------------tcagcacgctcaacatctca-aacggctaccagtactcctct
gagccagaactacgctctcactcctcttgcttcggacctag--------cggacctcgct
ctggag----------ccttggagcactccaaatacacctgtggcgg--aacctgtgaca
ggttcgaacaccaacactg-----gtggaagaaactctcaaactgctcgagcgagcccaa
ctt--------------------------------ggtcagagatagaagcagacttgag
agcttgcttca----gtcaagaacagt---------------------------------
--------------------tggagagcgacttcaacgaggaactgaccttggactaagg
tacgatggcacctcc---------------------------------------------
---------------------------------------ggcgaagagagcca-------
-ggagaggtaagggtggttgggttgggt--------------------------------
-------aaggcatgggttactaaacttatatgtatattaca----------ggtattct
attacttggtttt-----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------aggttgggtacctccgggat
acaagtacctgggacctggtaacgaccttgaccaaggagaaccaactaacccttcagacg
ccgctgcaaaagaacacgacgaggcttacagcaaataccaagcttctggcaaaaatcctt
acctgtacttctctcctgctgatcagcgcttcattgaccaaactcaagacgccaaagact
ggggtggtcgaattggtcactacttcttcagagctaagaaagcaattgctccaactct--
----cactgactctgctggtaaatctggaccttctggtgtag------------------
---------ctagacctggtaagaggagcaagcctcctgcacatatttttgtgaaccttg
ctaaggctaaaaaaaaacgtgcttctcttgctgcacagcagaggactcagactatgagtg
atggaggcgagcagcaacaggacaatgctgc--acagtcagctgctagagttgagagagc
agctgacggcagtggaggctctggtggtggtggtggtggtggtaatggtggtgttggggt
ttctacggggagctttgataaccaaacgcactatgacttccttggaggggggtgggtccg
tatcacagcgtatgcttcgcgacttgttca--------------tataaatatgcctgct
tctgaagagtaccatagaattttt---------gttagaaataatactgatactggtcaa
aagggaaagatgtctttggatgatgtgcacaca---cagatctggactccatggagtctg
gtagatgctaatgcatggggctgttggtttcagcc---aagtgactggcagtttattcaa
aactctatggctgaacttaatcttgaaacatttgagcaagag--atttttaatgttgtgc
ttaagacagttactgaacaaaacagtggaggtgcagatgct-atcaaggtctataacaat
gacttgacagcttcactcatggttgctttggacagcaacaattccttgccttacacacca
gctgcagctaccagtgaaactctggggttttacccatggaaaccaactgcaccagctcca
tacaggtactacttctatgtgcctagaaacct------------ttctgtcacatat---
------------------------acaaatgacac----------agatgctgtggtgga
tcaagtaaaccaaactgatccata---taattctcgctttttgactattgaaaacacaac
tccaatcaccttgctgagaacaggtgatgagtttgctactg-------------------
----------gtatatacaagtttgaatgtgaacctttgaaactgactc---------ac
ctttggcagaacaacagagctctggggatgcctccattgctgggagcactgccaccaaat
gacaatccaatcaacattcaaaa------------------aacag---------caagc
aacagatatggtcagtctcagatacaaggttctaacatactttctgaagtaactagactg
agaccagtgcagattggttttgctcaacctcatgatgtttttgaagccagtgacagtgga
cctttcaaagtgcctctgattagcatgtttccaacagacgg-----------------tg
ctgaccatgatggaaatggaaatgtcagatacatgtacagcaaacagcaygg------gg
ctacctat-----------gcacagcaagctgctgattttgttgaaaggtacacctatga
tccagcaggaactgggggaagaaactacaactatggctggactcaagatgtgccgtgggt
gagtcagcctgcacaggcacagatacttacacac--------aaagacccaataggtggt
aaaaatggtgttcatccacagaacatcatgaatacctatgggcctctaactgcatttcca
cacaccataccaatctacccacaaggacagatttgggacaaagaggttgatttgga----
---acataaaccaagactgcatgctaatgctccttttgtttgtaaaggcaaccctccagg
acagctttttgtcagacttgcaccaaacctgactgaccagtatgatcctaacagct---c
taacctgactaggattg-taacctatggaacattcttctggaaa--ggcaagctgacttt
tgtagctaagatgagaccaaaccagacc---------tggaaccca--------------
--------atacaccagatca-----------------------------caact-----
----------tctcgtggtgggtctggcagatatgatgacataa------------ccaa
gtggctgcctacacctacagga-cacatgagaacagatcctctgcttacagcacctattg
ctag---aaacatctacta-----------------actaaccatgtttctgtcattgct
tcacttactac--------ttaagacaa-taaaaatacaacatagaaatat---------
----------agactta------------------------------------------c
acatacaaatactagatggtaggttggtaa------tatggtatagattaactgttagaa
ataatagaacttttgg--tataactagatagtcaatactgttagatagaataa-------
-----------------------------------------------------agaagat
aatgtaa---------------tgggataatgtgggtggttggttggtttgcccttagac
tcgatgttaaggaccaaaaaaat---aataaaatctttgaaaatgaa-------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------------caaggact
actg--------------------------------------------------------
-------------------------
>NC_001718.1 Porcine parvovirus, complete genome
aatcttta-aactgaccaactgtctttgcgtatg-gtgacgtgatgacgcgcgctacgcg
cgctgccttcggcagtcacacgtcaccatcagcaaagacagttggtcagtt-taaagatt
aataagacattccattggctgaaaaga-----------------------------ggcg
ggaaattcaaaaaaagaggcgg----gaaaaaaagaggtggagcctaacactata--aat
acagtt-----gcttacttcagttagttcctttctgcttcagactgcacttcgctccaga
gacacagcta------caaactactctcagctactgcagc--atggcagcgggaaacact
tactcggaagaggtactaaaag-----------------------ctaccaactggcttc
aagataatgctcaaaaagaagcattctcttatgtatttaaaacacaaaaagtcaatctaa
atggaaaagaaattgcttggaataactacaacaaagatacaacagatgcggaaatgataa
acctacaaagaggagcagaaacatcatgggaccaggc---------------aacagaca
tggaatgggaat--------------------------------cagaaatcgacagcct
cacaaaacggcaagtactgatttttgactctcttgttaaaaaatgtctctttgaaggtat
attgcaaaagaacctaa--gtccaagtgactgctactggttcatacag-----catgaac
atggtcaagatactggctatcact----------gccatgtactactaggtggaaaaggc
ttacaacaagcaatgggaaaatggttcagaaaacaattaaacaatttatggag-------
----tagatggttaataatgcaatgcaaagtacctctaacaccagttgaaagaataaaat
taagggaattagcagaggatggtgagtgggtatcgctactaacctacactcacaaacaaa
ctaaaa-----------------aacaatatacaaaaatgactcattttggaaatatgat
tgcttactacttcctaaataaaaaaagaa-agac--aactg-------------aaagag
agcatggatattatctcagctcagattctggcttcatgacaaatttcttaaaagaaggc-
--------------------------------gagagacacttagtcagtcacctattta
ctg---------------------aagcaaataaacctgaaactgtggaaacaacggtta
ctacagctcaggaagccaaaagaggcagaatacaaacaaaaaaagaagtaagcataaaat
gcacaataagagactt--ggttaataaaagatgtactagcatagaagactggatgatgac
agatccagacagttatatagaaatgatgg-----------ctcaaaccggaggagaaaat
ttaatcaaaaatacactagaaataacaactcttactctagcaagaacaaaaacagcatat
gacttaatacttgaaaaggcaaaaccaagcatgctaccaacatttaatattagcaataca
-----agaacatgtaaaatattcagcatgcacaattggaactacattaaagtc-------
-tgccatgctataactt----------------------------------gtgtactaa
---------acagacaaggaggaaaaagaaatacaattctatttcatgggccagcatcaa
caggaaaaagtataattgctcaacacattgcaaact------tagttggtaatgttggtt
gctacaatgcagccaatgtgaactttccatttaatgactgtacaaataaaaact---taa
tatggattgaagaagcaggaaacttctctaaccaagtaaaccaatt-----------caa
agccatatgttcaggtcaaacaattagaattgaccaaaaaggtaaaggaagcaaacaaat
tgaaccaactcctgtaataatgactacaaatgaagacataactaaagttagaataggatg
cgaggaaagaccagaacatacacaaccaataagagacagaatgttaaacataaacctaac
cagaaaactgccaggtgattttggacttttagaagaaactgaatggccactaatatgtgc
ttggttggtaaagaaaggttaccaagcaacaatggctagctatatgcatcattggggaaa
tgtacctgattgg------tcagaaaaatgggagg-------------------------
--------------------agccaaaaatgcaaaccccaataaatacaccaa-------
--------------------cagactctcagatttccacatcagtgaaaacttcgccagc
ggacaacaactacgcagcaactccaatacaggaggacctgga-----tttagctttagcc
ttggag----------ccgtggagcgagccaacaacaccaactttcaccaacctgcactt
aactccaacacc---------------gccagattcagcaatacggac-accaagtccaa
ctt--------------------------------ggtcggaaatagaaaccgacataag
agcctgctttg----gtgaaaactg-----------------------------------
----------------------------tgcacccacaacaaa-----ccttgaataagg
taggatggcgcctcc---------------------------------------------
---------------------------------------tgcaaaaagagc---------
--aagaggtaagggtagtt---ttaaggg-------------------------------
--ggtggtgggcatacat--ataaaactaactgcaaat----------------aatttt
tttatatattaca-----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------ggacta-actctaccaggat
acaaataccttggtccaggaaactcactagaccaaggagaaccaactaatccatcagacg
ccgcagcaaaagaacacgacgaagcctacgacaaatacataaaatctggaaaaaatccat
acttctacttctcagcagctgatgaaaaattcataaaagaaactgaacacgcaaaagact
acggaggtaaaattggacattacttcttcagagcaaagcgtgcctttgctccaaaactct
cagaaacagactcaccaactacatctcaacaaccagaggtaagaagatcgccgagaaaac
acccagggtctaaaccaccaggaaaaagacctgctccaagacatatttttataaacttag
ctaaaaaaaaagctaaagggacatctaataca---------aactctaactcaatgagtg
aaaatgtggaacaacacaaccctattaatgcaggcactgaattgtctgcaacaggaaa--
---tgaatctgggggtgggggcggcggtggcgggggtaggggtgctgggggggttggtgt
gtctacaggtactttcaataatcaaacagaatttcaatacttgggggagggcttggttag
aatcactgcacacgcatcaagactcataca--------------tctaaatatgccagaa
cacgaaacatacaaaagaatacat---------gtactaaattca---gaatcaggggtg
gcgggacaaatggtacaagacgatgcacacaca---caaatggtaacaccttggtcacta
atagatgctaacgcatggggagtgtggttcaatcc---agcggactggcagttaatatcc
aacaacatgacagaaataaacttagttagttttgaacaagaa--atattcaatgtagtac
ttaaaacaattacagaatcagcaacc-------tcaccaccaaccaaaatatataataat
gatctaactgcaagcttaatggtcgcactagacaccaataacacacttccatacacacca
gcagcacctagaagtgaaacacttggtttttatccatggttacctacaaaaccaactcaa
tacagatattacctatcatgcatcagaaacctaa-------atccaccaacatacactgg
ac---------------aatcacaacaaataacagact----------------------
-----caatacaaacaggactacacagtgacattatgttctacacaatagaaaatgcagt
accaattcatcttctaagaacaggagatgaattctccacag-------------------
----------gaatatatcactttgacacaaaaccactaaaattaactc---------ac
tcatggcaaacaaacagatctctaggactgcctccaaaactactaactgaacctaccaca
gaaggag--accaacacccaggaac----------actaccagcag---------ctaac
acaagaaaaggttatcaccaaacaattaataatagcta---cacagaagcaacagcaatt
aggccagctcaggtaggatataatacaccatacatgaattttgaatactccaatggtgga
ccatttctaactcctatag------taccaacagcagacac-----------acaatata
atgatgatgaaccaaatggtgctataagatttacaatggattaccaacatggacacttaa
ccacatct-----------tcacaagagcta------------gaaagatacacattcaa
tccacaaagtaaatgtggaagagctccaaagcaacaatttaatcaacaggcacca-----
---ctaaacctagaaaatacaaataatggaacacttttaccttcagatccaataggaggg
aaatctaacatgcatttcatgaatacactcaatacatatggaccattaacagcactaaac
aatactgcacctgtatttccaaatggtcaaatatgggataaagaacttgatacaga----
---tctaaaacctagactacatgttacagctccatttgtttgtaaaaacaatccaccagg
acaactatttgtaaaaatagcaccaaacctaacagatgatttcaatgctgactctc---c
tcaacaacctagaataa-taacttattcaaacttttggtggaaa--ggaacactaacatt
cacagcaaaaatgagatccagtaatatg---------tggaaccct--------------
--------attcaacaacaca-----------------------------caacaacagc
agaaaacattggtaactatattcctacaaatattggtggcataagaatgtttccagaata
ttcacaacttataccaagaaaattatactagaaataactctgtaaataaaaactcagtta
cttggttaatcatgtacta------------------------------ctatcattgta
tacttcaataa---------------------aaataaattgtaaaatcaa---------
--------taaaactaa-------gttacttagtttc----------------------t
gtatacctatactaga------------------------------aataactctgtaaa
taaaaa------------ctcagttacttggttaatcatgt--actactatcattgt---
-----------------atacttcaata-------------------------aaaataa
attgtaaa------------atcaataaaactaagttacttagtttctgtataccaatta
tc-----------cccaaaaaac---aataaaattttaaaaagaaacaagctctcatgtg
tttactattaactaaaccaaccacact---------------------------------
---tatatgacctt-------------atgtctttagggtgggtgggtgggaattactat
gtattcctttgagttagttggtcgcctttgggcgactaaccaagcggctctgccgcttgg
----------------ttagtcgcacggcgaccaactaactc----------aaaggaat
ac---------------------atagtaattcccacccacccaccctaaagacataagg
tcatataagtgtggttggtttagtt