Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

CrossCorrelation performance #177

Open
tensionhead opened this issue Jan 5, 2022 · 0 comments
Open

CrossCorrelation performance #177

tensionhead opened this issue Jan 5, 2022 · 0 comments
Labels
Explore Examine novel functionality/proposed changes etc. Does not necessarily involve coding things. Performance Improve the number crunching

Comments

@tensionhead
Copy link
Contributor

Right now we have two inner loops over the individual channel combinations here:
https://github.com/esi-neuroscience/syncopy/blob/dev/syncopy/connectivity/ST_compRoutines.py#L358
as scipy.signal.fftconvolve is not able to work with tensors.

Maybe we find a better solution, @pantaray suggested having a look at scikit-image.
@tensionhead tensionhead added Explore Examine novel functionality/proposed changes etc. Does not necessarily involve coding things. Performance Improve the number crunching labels Jan 5, 2022
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
Explore Examine novel functionality/proposed changes etc. Does not necessarily involve coding things. Performance Improve the number crunching
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@tensionhead