From 5254ff2ea1e90e0ad23ded2b381007e42ea06b09 Mon Sep 17 00:00:00 2001 From: Thomas Weber Date: Wed, 19 Jun 2024 11:09:49 +0000 Subject: [PATCH] main_test.yaml typo --- .github/workflows/main_test.yaml | 62 ++++++++++++++++---------------- 1 file changed, 31 insertions(+), 31 deletions(-) diff --git a/.github/workflows/main_test.yaml b/.github/workflows/main_test.yaml index 161e7a8..017464a 100644 --- a/.github/workflows/main_test.yaml +++ b/.github/workflows/main_test.yaml @@ -6,45 +6,45 @@ on: - "**" jobs: -Linting: - runs-on: ubuntu-latest - steps: - - name: Checkout repository with submodules - uses: actions/checkout@v4 - with: - submodules: 'recursive' # Ensures all submodules are checked out - lfs: true # Ensures LFS objects for the main repo are pulled + Linting: + runs-on: ubuntu-latest + steps: + - name: Checkout repository with submodules + uses: actions/checkout@v4 + with: + submodules: 'recursive' # Ensures all submodules are checked out + lfs: true # Ensures LFS objects for the main repo are pulled - - name: Pull LFS objects in submodules - run: | - git submodule foreach --recursive 'git lfs pull' + - name: Pull LFS objects in submodules + run: | + git submodule foreach --recursive 'git lfs pull' - - name: Setup Python - uses: actions/setup-python@v2 + - name: Setup Python + uses: actions/setup-python@v2 - - name: Add Conda to system path - run: | - echo $CONDA/bin >> $GITHUB_PATH + - name: Add Conda to system path + run: | + echo $CONDA/bin >> $GITHUB_PATH - - name: Install dependencies - run: | - conda install -c conda-forge mamba + - name: Install dependencies + run: | + conda install -c conda-forge mamba - - name: Setup snakemake - run: | - mamba install -c conda-forge -c bioconda snakemake snakemake-storage-plugin-http + - name: Setup snakemake + run: | + mamba install -c conda-forge -c bioconda snakemake snakemake-storage-plugin-http - - name: List contents of .tests - run: | - tree -h .tests + - name: List contents of .tests + run: | + tree -h .tests - - name: List contents of workflow/data - run: | - tree -h workflow/data + - name: List contents of workflow/data + run: | + tree -h workflow/data - - name: Run Snakemake Lint - run: | - snakemake --lint + - name: Run Snakemake Lint + run: | + snakemake --lint # Testing_ashleys_with_custom_python: