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The license of PacBio's HiFiCNV and HiPhase prohibits usage with data that was not generated on a PacBio instrument.
Nallo already terminates with an error when HiPhase is used with the ONT preset and we use an older version of HiFiCNV with a more permissive license.
I generally agree with this, as this restriction may not be obvious to the user.
However, I think we should emit a warning when any PacBio tool affected by this license is run, regardless of preset.
Even if Nallo is run with a PacBio preset, there is no guarantee that the input actually is PacBio data. Moreover, it is possible to completely forgo any presets and configure everything manually.
The text was updated successfully, but these errors were encountered:
Description of feature
The license of PacBio's HiFiCNV and HiPhase prohibits usage with data that was not generated on a PacBio instrument.
Nallo already terminates with an error when HiPhase is used with the ONT preset and we use an older version of HiFiCNV with a more permissive license.
I generally agree with this, as this restriction may not be obvious to the user.
However, I think we should emit a warning when any PacBio tool affected by this license is run, regardless of preset.
Even if Nallo is run with a PacBio preset, there is no guarantee that the input actually is PacBio data. Moreover, it is possible to completely forgo any presets and configure everything manually.
The text was updated successfully, but these errors were encountered: