DESCRIPTION

Package: IFC
Encoding: UTF-8
Type: Package
Title: Tools for Imaging Flow Cytometry
Version: 0.2.1.708
Date: 2025-01-07
Maintainer: Yohann Demont <git.demont@gmail.com>
Authors@R: c(person(given = 'Yohann', family = 'Demont', email = 'git.demont@gmail.com', role = c('aut', 'cre')), person(given = 'Gautier', family = 'Stoll', role = 'ctb'), person(given = 'Guido', family = 'Kroemer', role = 'ldr'), person(given = 'Jean-Pierre', family = 'Marolleau', role = 'ldr'), person(given = 'Loïc', family = 'Garçon', role = 'ldr'))
BugReports: https://github.com/gitdemont/IFC/issues
Description: Contains several tools to treat imaging flow cytometry data from 'ImageStream®' and 'FlowSight®' cytometers ('Amnis®' 'Cytek®'). Provides an easy and simple way to read and write .fcs, .rif, .cif and .daf files. Information such as masks, features, regions and populations set within these files can be retrieved for each single cell. In addition, raw data such as images stored can also be accessed. Users, may hopefully increase their productivity thanks to dedicated functions to extract, visualize, manipulate and export 'IFC' data. Toy data example can be installed through the 'IFCdata' package of approximately 32 MB, which is available in a 'drat' repository <https://gitdemont.github.io/IFCdata/>. See file 'COPYRIGHTS' and file 'AUTHORS' for a list of copyright holders and authors.
Copyright: file inst/COPYRIGHTS
License: GPL-3
Depends: R (>= 3.4.0)
Imports: Rcpp (>= 0.10.0), xml2, utils, grid, gridExtra, gridGraphics, lattice, latticeExtra, KernSmooth, DT, visNetwork
Suggests: IFCdata, shiny, reticulate, png, jpeg
LinkingTo: Rcpp
Additional_repositories: https://gitdemont.github.io/IFCdata/