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bug/metric-errors-dict #68

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quinnwai opened this issue Mar 29, 2024 · 0 comments

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bug good first issue

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quinnwai commented Mar 29, 2024

when an error is written to the metrics file, it is not serialized into dict and so is formatted weirdly as a defaultdict:

error: !!python/object/apply:collections.defaultdict
args:
- !!python/name:vrs_anvil.annotator.recursive_defaultdict ''
dictitems:
Expected reference sequence A on GRCh38:chr19 at positions (54220998, 54220999) but found T: 1
Expected reference sequence A on GRCh38:chr19 at positions (54221653, 54221654) but found T: 1
Unable to parse data as gnomad variation: 1

quinnwai added bug good first issue labels

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