From dd71969c3f1a6a7717730d29bb1c168b75fe15f8 Mon Sep 17 00:00:00 2001 From: jfnavarro Date: Wed, 8 Jan 2025 11:16:22 +0100 Subject: [PATCH] Update tests --- stpipeline/core/pipeline.py | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/stpipeline/core/pipeline.py b/stpipeline/core/pipeline.py index 33c173b..cf6efd8 100755 --- a/stpipeline/core/pipeline.py +++ b/stpipeline/core/pipeline.py @@ -897,7 +897,9 @@ def run(self): self.disable_umi, self.disable_barcode) # update qa_stats - + self.qa_stats.input_reads_reverse = stats["input_reads_reverse"] + self.qa_stats.reads_after_trimming_forward = stats["reads_after_trimming_forward"] + self.qa_stats.qa_stats.reads_after_trimming_reverse = stats["reads_after_trimming_reverse"] except Exception: raise