Error in myY[, 2] : 量度数目不对 此外: There were 50 or more warnings (use warnings() to see the first 50)

[Jiajia-TaoTao]

[1] "--------------------- Welcome to GAPIT ----------------------------"
[1] "GLM"
[1] "--------------------Processing traits----------------------------------"
[1] "Phenotype provided!"
[1] "The 1 model in all."
[1] "GLM"
[1] "GAPIT.DP in process..."
[1] "Converting genotype..."
[1] "Converting HapMap format to numerical under model of Middle"
[1] "Perform numericalization"
[1] "Succesfuly finished converting HapMap which has bits of 2"
[1] "Converting genotype done."
[1] "GAPIT will filter marker with MAF setting !!"
[1] "The markers will be filtered by SNP.MAF: 0"
maf_index
TRUE
3093
[1] "Calculating kinship..."
[1] "Number of individuals and SNPs are 281 and 3093"
[1] "Calculating ZHANG relationship defined by Zhiwu Zhang..."
[1] "substracting mean..."
[1] "Getting X'X..."
[1] "Adjusting..."
[1] "Adjustment by the minimum diagonal"
[1] "Calculating kinship with Zhang method: done"
[1] "kinship calculated"
[1] "Creating heat map for kinship..."
[1] "Kinship heat map created"
[1] "Adding IDs to kinship..."
[1] "Writing kinship to file..."
[1] "Kinship save as file"
[1] "Kinship created!"
[1] "Filting marker for GAPIT.Genotype.View function ..."
[1] "The average distance between markers are ..."
[1] NA NA 0.105 0.907 0.164 NA
[1] "GAPIT.Genotype.View . pdfs generate.successfully!"
NULL
[1] "GAPIT.DP accomplished successfully for multiple traits. Results are saved"
[1] "Processing trait: EarHT"
[1] "GAPIT.Phenotype.View in press..."
Error in myY[, 2] : 量度数目不对
此外: There were 50 or more warnings (use warnings() to see the first 50)