From 35592e04735b3e843129128007d06f6f42b0df63 Mon Sep 17 00:00:00 2001
From: Joshua Gray <61458311+jgray-19@users.noreply.github.com>
Date: Fri, 19 Jan 2024 11:11:25 +0000
Subject: [PATCH 1/8] Automate install of PhotonAttenuation Package
---
.github/workflows/main.yml | 3 +++
1 file changed, 3 insertions(+)
diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
index 5791757..46219ec 100644
--- a/.github/workflows/main.yml
+++ b/.github/workflows/main.yml
@@ -13,6 +13,9 @@ jobs:
name: Run MATLAB Tests and Generate Artifacts
runs-on: ubuntu-latest
steps:
+ - name: Get Photon Attenuation Package
+ run: wget https://uk.mathworks.com/matlabcentral/mlc-downloads/downloads/submissions/12092/versions/7/download/zip/PhotonAttenuation.zip
+ run: unzip PhotonAttenuation.zip PhotonAttenuationQ.m -d src/
- name: Check out repository
uses: actions/checkout@v3
- name: Set up MATLAB
From 592ca41a7cf1333cf356a08d5e24f22813dcc5a9 Mon Sep 17 00:00:00 2001
From: Joshua Gray <61458311+jgray-19@users.noreply.github.com>
Date: Fri, 19 Jan 2024 11:13:50 +0000
Subject: [PATCH 2/8] Update main.yml
---
.github/workflows/main.yml | 1 +
1 file changed, 1 insertion(+)
diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
index 46219ec..e4a7e2c 100644
--- a/.github/workflows/main.yml
+++ b/.github/workflows/main.yml
@@ -15,6 +15,7 @@ jobs:
steps:
- name: Get Photon Attenuation Package
run: wget https://uk.mathworks.com/matlabcentral/mlc-downloads/downloads/submissions/12092/versions/7/download/zip/PhotonAttenuation.zip
+ - name: Retrieve necessary file
run: unzip PhotonAttenuation.zip PhotonAttenuationQ.m -d src/
- name: Check out repository
uses: actions/checkout@v3
From 47ece225d7c92cb1b5571b36c08724187d4636eb Mon Sep 17 00:00:00 2001
From: Joshua Gray <61458311+jgray-19@users.noreply.github.com>
Date: Mon, 22 Jan 2024 14:41:51 +0000
Subject: [PATCH 3/8] Remove Photon Attenuation from GitHub - Need to add a
requirements file
---
.../s6CL3dizkMQ590wOtseMqD3hQCkd.xml | 2 -
.../s6CL3dizkMQ590wOtseMqD3hQCkp.xml | 2 -
.../c-CMkIRgI5pOTNwlupRfHVTtCkMp.xml | 2 -
.../Rb0sUON2uFIV3x_aUiumn_9fAtUd.xml} | 0
.../Rb0sUON2uFIV3x_aUiumn_9fAtUp.xml} | 2 +-
.../xTqAVUPretUAtoKCQmkE1LMCCicd.xml} | 0
.../xTqAVUPretUAtoKCQmkE1LMCCicp.xml} | 0
.../JH4NDwDeFn0M-MIn9_mrJzbW_Pop.xml | 2 -
.../d3mC_JcZgcgOZrbGv4E7hfBPjQEd.xml | 6 -
.../d3mC_JcZgcgOZrbGv4E7hfBPjQEp.xml | 2 -
.../PhotonAttenuationLicense.txt | 24 -
.../PhotonAttenuation/PhotonAttenuationQ.m | 986 ------------------
12 files changed, 1 insertion(+), 1027 deletions(-)
delete mode 100644 resources/project/EEtUlUb-dLAdf0KpMVivaUlztwA/s6CL3dizkMQ590wOtseMqD3hQCkd.xml
delete mode 100644 resources/project/EEtUlUb-dLAdf0KpMVivaUlztwA/s6CL3dizkMQ590wOtseMqD3hQCkp.xml
delete mode 100644 resources/project/FjfLEenEuSm4QUSLnwd8ncPq2CI/c-CMkIRgI5pOTNwlupRfHVTtCkMp.xml
rename resources/project/{FjfLEenEuSm4QUSLnwd8ncPq2CI/c-CMkIRgI5pOTNwlupRfHVTtCkMd.xml => R6m7AxFfSX7StHtVJ9WG44h96GM/Rb0sUON2uFIV3x_aUiumn_9fAtUd.xml} (100%)
rename resources/project/{c-CMkIRgI5pOTNwlupRfHVTtCkM/q2uO6YmKhEK_TVky4g5tlkEq_B8d.xml => R6m7AxFfSX7StHtVJ9WG44h96GM/Rb0sUON2uFIV3x_aUiumn_9fAtUp.xml} (50%)
rename resources/project/{c-CMkIRgI5pOTNwlupRfHVTtCkM/JH4NDwDeFn0M-MIn9_mrJzbW_Pod.xml => Rb0sUON2uFIV3x_aUiumn_9fAtU/xTqAVUPretUAtoKCQmkE1LMCCicd.xml} (100%)
rename resources/project/{c-CMkIRgI5pOTNwlupRfHVTtCkM/q2uO6YmKhEK_TVky4g5tlkEq_B8p.xml => Rb0sUON2uFIV3x_aUiumn_9fAtU/xTqAVUPretUAtoKCQmkE1LMCCicp.xml} (100%)
delete mode 100644 resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/JH4NDwDeFn0M-MIn9_mrJzbW_Pop.xml
delete mode 100644 resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/d3mC_JcZgcgOZrbGv4E7hfBPjQEd.xml
delete mode 100644 resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/d3mC_JcZgcgOZrbGv4E7hfBPjQEp.xml
delete mode 100644 src/materials/PhotonAttenuation/PhotonAttenuationLicense.txt
delete mode 100644 src/materials/PhotonAttenuation/PhotonAttenuationQ.m
diff --git a/resources/project/EEtUlUb-dLAdf0KpMVivaUlztwA/s6CL3dizkMQ590wOtseMqD3hQCkd.xml b/resources/project/EEtUlUb-dLAdf0KpMVivaUlztwA/s6CL3dizkMQ590wOtseMqD3hQCkd.xml
deleted file mode 100644
index 35a8375..0000000
--- a/resources/project/EEtUlUb-dLAdf0KpMVivaUlztwA/s6CL3dizkMQ590wOtseMqD3hQCkd.xml
+++ /dev/null
@@ -1,2 +0,0 @@
-
-
\ No newline at end of file
diff --git a/resources/project/EEtUlUb-dLAdf0KpMVivaUlztwA/s6CL3dizkMQ590wOtseMqD3hQCkp.xml b/resources/project/EEtUlUb-dLAdf0KpMVivaUlztwA/s6CL3dizkMQ590wOtseMqD3hQCkp.xml
deleted file mode 100644
index a5328cd..0000000
--- a/resources/project/EEtUlUb-dLAdf0KpMVivaUlztwA/s6CL3dizkMQ590wOtseMqD3hQCkp.xml
+++ /dev/null
@@ -1,2 +0,0 @@
-
-
\ No newline at end of file
diff --git a/resources/project/FjfLEenEuSm4QUSLnwd8ncPq2CI/c-CMkIRgI5pOTNwlupRfHVTtCkMp.xml b/resources/project/FjfLEenEuSm4QUSLnwd8ncPq2CI/c-CMkIRgI5pOTNwlupRfHVTtCkMp.xml
deleted file mode 100644
index 77bbc59..0000000
--- a/resources/project/FjfLEenEuSm4QUSLnwd8ncPq2CI/c-CMkIRgI5pOTNwlupRfHVTtCkMp.xml
+++ /dev/null
@@ -1,2 +0,0 @@
-
-
\ No newline at end of file
diff --git a/resources/project/FjfLEenEuSm4QUSLnwd8ncPq2CI/c-CMkIRgI5pOTNwlupRfHVTtCkMd.xml b/resources/project/R6m7AxFfSX7StHtVJ9WG44h96GM/Rb0sUON2uFIV3x_aUiumn_9fAtUd.xml
similarity index 100%
rename from resources/project/FjfLEenEuSm4QUSLnwd8ncPq2CI/c-CMkIRgI5pOTNwlupRfHVTtCkMd.xml
rename to resources/project/R6m7AxFfSX7StHtVJ9WG44h96GM/Rb0sUON2uFIV3x_aUiumn_9fAtUd.xml
diff --git a/resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/q2uO6YmKhEK_TVky4g5tlkEq_B8d.xml b/resources/project/R6m7AxFfSX7StHtVJ9WG44h96GM/Rb0sUON2uFIV3x_aUiumn_9fAtUp.xml
similarity index 50%
rename from resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/q2uO6YmKhEK_TVky4g5tlkEq_B8d.xml
rename to resources/project/R6m7AxFfSX7StHtVJ9WG44h96GM/Rb0sUON2uFIV3x_aUiumn_9fAtUp.xml
index a75f7a8..53ebd09 100644
--- a/resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/q2uO6YmKhEK_TVky4g5tlkEq_B8d.xml
+++ b/resources/project/R6m7AxFfSX7StHtVJ9WG44h96GM/Rb0sUON2uFIV3x_aUiumn_9fAtUp.xml
@@ -1,2 +1,2 @@
-
\ No newline at end of file
+
\ No newline at end of file
diff --git a/resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/JH4NDwDeFn0M-MIn9_mrJzbW_Pod.xml b/resources/project/Rb0sUON2uFIV3x_aUiumn_9fAtU/xTqAVUPretUAtoKCQmkE1LMCCicd.xml
similarity index 100%
rename from resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/JH4NDwDeFn0M-MIn9_mrJzbW_Pod.xml
rename to resources/project/Rb0sUON2uFIV3x_aUiumn_9fAtU/xTqAVUPretUAtoKCQmkE1LMCCicd.xml
diff --git a/resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/q2uO6YmKhEK_TVky4g5tlkEq_B8p.xml b/resources/project/Rb0sUON2uFIV3x_aUiumn_9fAtU/xTqAVUPretUAtoKCQmkE1LMCCicp.xml
similarity index 100%
rename from resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/q2uO6YmKhEK_TVky4g5tlkEq_B8p.xml
rename to resources/project/Rb0sUON2uFIV3x_aUiumn_9fAtU/xTqAVUPretUAtoKCQmkE1LMCCicp.xml
diff --git a/resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/JH4NDwDeFn0M-MIn9_mrJzbW_Pop.xml b/resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/JH4NDwDeFn0M-MIn9_mrJzbW_Pop.xml
deleted file mode 100644
index 8158315..0000000
--- a/resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/JH4NDwDeFn0M-MIn9_mrJzbW_Pop.xml
+++ /dev/null
@@ -1,2 +0,0 @@
-
-
\ No newline at end of file
diff --git a/resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/d3mC_JcZgcgOZrbGv4E7hfBPjQEd.xml b/resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/d3mC_JcZgcgOZrbGv4E7hfBPjQEd.xml
deleted file mode 100644
index 7a6326b..0000000
--- a/resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/d3mC_JcZgcgOZrbGv4E7hfBPjQEd.xml
+++ /dev/null
@@ -1,6 +0,0 @@
-
-
-
-
-
-
\ No newline at end of file
diff --git a/resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/d3mC_JcZgcgOZrbGv4E7hfBPjQEp.xml b/resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/d3mC_JcZgcgOZrbGv4E7hfBPjQEp.xml
deleted file mode 100644
index fba49e1..0000000
--- a/resources/project/c-CMkIRgI5pOTNwlupRfHVTtCkM/d3mC_JcZgcgOZrbGv4E7hfBPjQEp.xml
+++ /dev/null
@@ -1,2 +0,0 @@
-
-
\ No newline at end of file
diff --git a/src/materials/PhotonAttenuation/PhotonAttenuationLicense.txt b/src/materials/PhotonAttenuation/PhotonAttenuationLicense.txt
deleted file mode 100644
index 4f2957c..0000000
--- a/src/materials/PhotonAttenuation/PhotonAttenuationLicense.txt
+++ /dev/null
@@ -1,24 +0,0 @@
-Copyright (c) 2016, Jaroslaw Tuszynski
-All rights reserved.
-
-Redistribution and use in source and binary forms, with or without
-modification, are permitted provided that the following conditions are
-met:
-
- * Redistributions of source code must retain the above copyright
- notice, this list of conditions and the following disclaimer.
- * Redistributions in binary form must reproduce the above copyright
- notice, this list of conditions and the following disclaimer in
- the documentation and/or other materials provided with the distribution
-
-THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
-AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
-IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
-ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE
-LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
-CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
-SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
-INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
-CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
-ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
-POSSIBILITY OF SUCH DAMAGE.
diff --git a/src/materials/PhotonAttenuation/PhotonAttenuationQ.m b/src/materials/PhotonAttenuation/PhotonAttenuationQ.m
deleted file mode 100644
index b0b1c25..0000000
--- a/src/materials/PhotonAttenuation/PhotonAttenuationQ.m
+++ /dev/null
@@ -1,986 +0,0 @@
-function [AttCoef, AbsEdge] = PhotonAttenuationQ(Element, Energy, Options)
-%PhotonAttenuationQ NIST attenuation cooeficiant tables
-% for photon interaction with elements.
-%
-% [AttCoef, AbsEdge] = PhotonAttenuationQ(Material, Energy, Options)
-% Function providing the attenuation and energy absorption of x-ray and
-% gamma-ray photons in various elements, based on NIST report 5632, by
-% J. Hubbell and S.M. Seltzer. This is a quick version of the function with
-% narrow range of inputs and outputs.
-%
-% Input :
-% Element - atomic number Z in [1, 100] range, or array of Z numbers
-% Energy - single energy or vector of energies. For best results should
-% be in [0.001, 20] MeV range.
-% Options - specifies what to return. String or number:
-% 1 - 'mac' - function returns Mass Attenuation Coefficients in cm^2/g
-% (default)
-% 2 - 'meac' - function returns Mass Energy-Absorption Coefficients
-% in cm^2/g. Data is available only for elements with Z<93. See
-% link below for more info:
-% http://physics.nist.gov/PhysRefData/XrayMassCoef/chap3.html
-% Output :
-% AttCoef - Either Mass Attenuation Coefficients Mass Energy-Absorption
-% Coefficients in cm^2/g depending on 'Option'. Columns
-% correspond to material and rows correspond to energy.
-% AbsEdge - a list of absorbtion edges in all of 'Element's. One edge per
-% row; columns are:
-% 1) Edge number for this elements
-% 2) Atomic number Z of elements
-% 3) Energy of the edge in MeV
-% 4) Attenuation Coefficients of edge's low value
-% 5) Attenuation Coefficients of edge's high value
-%
-% History:
-% Written by Jarek Tuszynski (SAIC), 2006
-% Updated by Jarek Tuszynski (Leidos), 2014, jaroslaw.w.tuszynski@leidos.com
-% Inspired by John Schweppe Mathematica code available at
-% http://library.wolfram.com/infocenter/MathSource/4267/
-%
-% See Also:
-% PhotonAttenuation, ParseChemicalFormula, PhysProps
-%
-% References:
-% Tables are based on "X-Ray Attenuation and Absorption for Materials of
-% Dosimetric Interest" (XAAMDI) database (NIST 5632 report):
-% J. Hubbell and S.M. Seltzer, "Tables of X-Ray Mass Attenuation
-% Coefficients and Mass Energy-Absorption Coefficients 1 keV to 20 MeV for
-% Elements Z = 1 to 92 and 48 Additional Substances of Dosimetric Interest, "
-% National Institute of Standards and Technology report NISTIR 5632 (1995).
-% http://physics.nist.gov/PhysRefData/XrayMassCoef/cover.html
-%
-% MAC values for elements 93 to 100 (Neptunium to Fermium) came from
-% XCOM: Photon Cross Sections Database (NBSIR 87-3597):
-% Those tables give photon's "total attenuation coefficients" for
-% elements with atomic number (Z) smaller than 100.
-% Photon energy range is from 0.001 MeV to 100 GeV.
-% http://physics.nist.gov/PhysRefData/Xcom/Text/XCOM.html
-%
-% Details:
-% This function is intended as a low-level, 'bare-bones' version of
-% PhotonAttenuation function and contain mostly the NIST tables and a
-% little code to look them up and interpolate results. Very few input
-% options are allowed. See PhotonAttenuation function for more options.
-%
-% The Attenuation tables are stored in two formats: standard grid values
-% defined for all the elements and values at absorbtion edges are stored
-% separately. That way they take less space and absorbtion edge data is
-% easier to extract. The values in the table are for room temperature
-% and pressure.
-%
-% Interpolation is done using MATLAB's interp1 function to log-log data of
-% coefficients as function of energy. Linear interpolation is used near
-% absorbtion edges and cubic otherwise.
-%
-% Examples:
-% %% Plot Photon Mass Attenuation Coefficients of elements as function of
-% % energy and atomic number
-% figure
-% Z = 1:100; % elements with Z in 1-100 range
-% E = exp(-6.9:0.01:2.99); % define energy grid
-% [mac, CEdge] = PhotonAttenuationQ(Z, E);
-% imagesc(log10(mac)); colorbar;
-% title('Photon Mass Attenuation Coefficients and absorbtion edges');
-% xlabel('Atomic Number of Elements');
-% ylabel('Energy in MeV');
-% set(gca,'YTick',1:123:1000);
-% set(gca,'YTickLabel',exp(-6.9:1.23:2.99))
-% hold on
-% ed = accumarray([CEdge(:,1),CEdge(:,2)],CEdge(:,3));
-% plot((log(ed')+6.9)/0.01 ,'LineWidth',4); % plot absorbtion edges
-% legend({'K','L1','L2','L3','M1','M2','M3','M4','M5','N1','N2','N3','N4','N5'}, 'Location', 'west');
-% hold off;
-%
-% %% Plot Mass Energy-Absorption Coefficients of elements
-% % energy and atomic number
-% figure
-% Z = 1:92; % elements with Z in 1-92 range (Elements higher than 92 are not defined)
-% E = exp(-6.9:0.01:2.99); % define energy grid
-% meac = PhotonAttenuationQ(Z, E, 'meac');
-% imagesc(log10(meac)); colorbar;
-% title('Photon Mass Energy-Absorption Coefficients');
-% xlabel('Atomic Number of Elements');
-% ylabel('Energy in MeV');
-% set(gca,'YTick',1:123:1000);
-% set(gca,'YTickLabel',exp(-6.9:1.23:2.99))
-%
-% %% Plot Photon Attenuation Coefficients for Uranium
-% figure
-% E = exp(-6.9:0.01:2.99); % define energy grid
-% mac = PhotonAttenuationQ(92, E, 'mac');
-% meac = PhotonAttenuationQ(92, E, 'meac');
-% loglog(E, mac); hold on;
-% loglog(E, meac, 'b-.');
-% legend({'mac', 'meac'});
-% ylabel('Attenuation in cm^2/g');
-% xlabel('Photon Energy in MeV');
-% title({'Photon Attenuation Coefficients for Uranium',...
-% 'see http://physics.nist.gov/PhysRefData/XrayMassCoef/ElemTab/z92.html'});
-% %compare with http://physics.nist.gov/PhysRefData/XrayMassCoef/ElemTab/z92.html
-
-if (nargin<3), Options = 1; end
-if (ischar(Options))
- X = {'mac','meac'};
- Options = find(strcmpi( Options, X),1);
-end
-if (isempty(Options)), Options = 1; end
-
-%% Read in Hard-wired data tables
-persistent mac meac edges
-%--------------------------------------------------------------------------
-% Hard-wire the table of x-ray mass attenuation coefficients (MAC) and mass
-% energy absorption coefficients (MEAC). Units:
-% energy is in MeV, and both MAC and MEAC are in cm^2/g.
-% The first 2 tables contain values using uniform energy sampling. NIST tables
-% contain both values for uniform energy sampling and for the non-uniform
-% absorption edges. The non-uniform values will be provided separatly
-%--------------------------------------------------------------------------
-energy = [...
-1.000E-3, 1.500E-3, 2.000E-3, 3.000E-3, 4.000E-3, 5.000E-3, 6.000E-3, 8.000E-3, 1.000E-2, 1.500E-2, 2.000E-2, 3.000E-2, 4.000E-2, 5.000E-2, 6.000E-2, 8.000E-2, 1.000E-1, 1.500E-1, 2.000E-1, 3.000E-1, 4.000E-1, 5.000E-1, 6.000E-1, 8.000E-1, 1.000 , 1.250 , 1.500 , 2.000 , 3.000 , 4.000 , 5.000 , 6.000 , 8.000 , 1.000E+1, 1.500E+1, 2.000E+1];
-if (nargin<2), Energy=energy; end
-
-%--------------------------------------------------------------------------
-%% Hard-wire the table of x-ray mass attenuation coefficients in cm^2/g
-%--------------------------------------------------------------------------
-if (Options==1 && isempty(mac))
-mac = [...
-7.217 , 2.148 , 1.059 , 5.612E-1, 4.546E-1, 4.193E-1, 4.042E-1, 3.914E-1, 3.854E-1, 3.764E-1, 3.695E-1, 3.570E-1, 3.458E-1, 3.355E-1, 3.260E-1, 3.091E-1, 2.944E-1, 2.651E-1, 2.429E-1, 2.112E-1, 1.893E-1, 1.729E-1, 1.599E-1, 1.405E-1, 1.263E-1, 1.129E-1, 1.027E-1, 8.769E-2, 6.921E-2, 5.806E-2, 5.049E-2, 4.498E-2, 3.746E-2, 3.254E-2, 2.539E-2, 2.153E-2;...
-6.084E+1, 1.676E+1, 6.863 , 2.007 , 9.329E-1, 5.766E-1, 4.195E-1, 2.933E-1, 2.476E-1, 2.092E-1, 1.960E-1, 1.838E-1, 1.763E-1, 1.703E-1, 1.651E-1, 1.562E-1, 1.486E-1, 1.336E-1, 1.224E-1, 1.064E-1, 9.535E-2, 8.707E-2, 8.054E-2, 7.076E-2, 6.362E-2, 5.688E-2, 5.173E-2, 4.422E-2, 3.503E-2, 2.949E-2, 2.577E-2, 2.307E-2, 1.940E-2, 1.703E-2, 1.363E-2, 1.183E-2;...
-2.339E+2, 6.668E+1, 2.707E+1, 7.549 , 3.114 , 1.619 , 9.875E-1, 5.054E-1, 3.395E-1, 2.176E-1, 1.856E-1, 1.644E-1, 1.551E-1, 1.488E-1, 1.438E-1, 1.356E-1, 1.289E-1, 1.158E-1, 1.060E-1, 9.210E-2, 8.249E-2, 7.532E-2, 6.968E-2, 6.121E-2, 5.503E-2, 4.921E-2, 4.476E-2, 3.830E-2, 3.043E-2, 2.572E-2, 2.257E-2, 2.030E-2, 1.725E-2, 1.529E-2, 1.252E-2, 1.109E-2;...
-6.041E+2, 1.797E+2, 7.469E+1, 2.127E+1, 8.685 , 4.369 , 2.527 , 1.124 , 6.466E-1, 3.070E-1, 2.251E-1, 1.792E-1, 1.640E-1, 1.554E-1, 1.493E-1, 1.401E-1, 1.328E-1, 1.190E-1, 1.089E-1, 9.463E-2, 8.471E-2, 7.739E-2, 7.155E-2, 6.286E-2, 5.652E-2, 5.054E-2, 4.597E-2, 3.938E-2, 3.138E-2, 2.664E-2, 2.347E-2, 2.121E-2, 1.819E-2, 1.627E-2, 1.361E-2, 1.227E-2;...
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-7.190E+3, 3.620E+3, 2.040E+3, 8.390E+2, 1.430E+3, 9.650E+2, 6.760E+2, 3.350E+2, 1.940E+2, 7.060E+1, 7.710E+1, 4.450E+1, 2.150E+1, 1.220E+1, 7.650 , 3.700 , 2.130 , 2.770 , 1.390 , 5.570E-1, 3.120E-1, 2.100E-1, 1.580E-1, 1.070E-1, 8.260E-2, 6.630E-2, 5.800E-2, 5.050E-2, 4.590E-2, 4.530E-2, 4.600E-2, 4.720E-2, 5.020E-2, 5.350E-2, 6.100E-2, 6.710E-2;...
-7.370E+3, 3.730E+3, 2.100E+3, 8.640E+2, 1.050E+3, 9.900E+2, 6.640E+2, 3.430E+2, 1.980E+2, 7.240E+1, 7.940E+1, 4.550E+1, 2.200E+1, 1.250E+1, 7.860E+0, 3.800E+0, 2.190E+0, 2.820E+0, 1.420E+0, 5.680E-1, 3.180E-1, 2.140E-1, 1.600E-1, 1.080E-1, 8.330E-2, 6.670E-2, 5.820E-2, 5.060E-2, 4.600E-2, 4.530E-2, 4.600E-2, 4.710E-2, 5.020E-2, 5.340E-2, 6.100E-2, 6.700E-2;...
-7.540E+3, 3.830E+3, 2.150E+3, 8.890E+2, 1.040E+3, 1.020E+3, 6.790E+2, 3.510E+2, 2.030E+2, 7.410E+1, 8.140E+1, 4.650E+1, 2.260E+1, 1.280E+1, 8.070E+0, 3.910E+0, 2.250E+0, 2.870E+0, 1.440E+0, 5.790E-1, 3.240E-1, 2.180E-1, 1.630E-1, 1.090E-1, 8.410E-2, 6.710E-2, 5.850E-2, 5.080E-2, 4.610E-2, 4.530E-2, 4.600E-2, 4.710E-2, 5.010E-2, 5.340E-2, 6.100E-2, 6.700E-2;...
-7.840E+3, 3.950E+3, 2.250E+3, 9.290E+2, 4.840E+2, 1.060E+3, 6.680E+2, 3.640E+2, 2.100E+2, 7.710E+1, 8.390E+1, 4.830E+1, 2.350E+1, 1.340E+1, 8.420E+0, 4.080E+0, 2.350E+0, 2.970E+0, 1.500E+0, 6.000E-1, 3.360E-1, 2.250E-1, 1.680E-1, 1.130E-1, 8.620E-2, 6.870E-2, 5.970E-2, 5.180E-2, 4.690E-2, 4.610E-2, 4.680E-2, 4.790E-2, 5.090E-2, 5.420E-2, 6.190E-2, 6.810E-2;...
-7.890E+3, 4.060E+3, 2.310E+3, 9.540E+2, 4.970E+2, 9.270E+2, 6.850E+2, 3.720E+2, 2.150E+2, 7.890E+1, 8.580E+1, 4.920E+1, 2.400E+1, 1.370E+1, 8.640E+0, 4.190E+0, 2.410E+0, 3.030E+0, 1.520E+0, 6.110E-1, 3.420E-1, 2.290E-1, 1.710E-1, 1.140E-1, 8.700E-2, 6.910E-2, 6.000E-2, 5.200E-2, 4.700E-2, 4.620E-2, 4.680E-2, 4.790E-2, 5.090E-2, 5.420E-2, 6.190E-2, 6.810E-2;...
-7.790E+3, 4.220E+3, 2.400E+3, 9.920E+2, 5.170E+2, 9.590E+2, 7.110E+2, 3.830E+2, 2.220E+2, 8.160E+1, 4.010E+1, 5.080E+1, 2.490E+1, 1.420E+1, 8.970E+0, 4.360E+0, 2.510E+0, 3.120E+0, 1.570E+0, 6.310E-1, 3.520E-1, 2.360E-1, 1.750E-1, 1.170E-1, 8.890E-2, 7.040E-2, 6.110E-2, 5.280E-2, 4.760E-2, 4.670E-2, 4.740E-2, 4.840E-2, 5.150E-2, 5.480E-2, 6.260E-2, 6.890E-2;...
-7.130E+3, 4.320E+3, 2.460E+3, 1.010E+3, 5.290E+2, 9.770E+2, 7.250E+2, 3.890E+2, 2.260E+2, 8.310E+1, 4.090E+1, 5.170E+1, 2.540E+1, 1.450E+1, 9.160E+0, 4.450E+0, 2.570E+0, 3.140E+0, 1.590E+0, 6.400E-1, 3.570E-1, 2.390E-1, 1.770E-1, 1.180E-1, 8.940E-2, 7.070E-2, 6.120E-2, 5.280E-2, 4.750E-2, 4.660E-2, 4.720E-2, 4.820E-2, 5.120E-2, 5.450E-2, 6.230E-2, 6.860E-2;...
-];
-end
-
-%--------------------------------------------------------------------------
-% Hard-wire a table of x-ray mass energy absorption coefficients in cm^2/g.
-%--------------------------------------------------------------------------
-if (Options==2 && isempty(meac))
-meac = [ ...
-6.820 , 1.752 , 6.643E-1, 1.693E-1, 6.549E-2, 3.278E-2, 1.996E-2, 1.160E-2, 9.849E-3, 1.102E-2, 1.355E-2, 1.863E-2, 2.315E-2, 2.709E-2, 3.053E-2, 3.620E-2, 4.063E-2, 4.813E-2, 5.254E-2, 5.695E-2, 5.860E-2, 5.900E-2, 5.875E-2, 5.739E-2, 5.556E-2, 5.311E-2, 5.075E-2, 4.650E-2, 3.992E-2, 3.523E-2, 3.174E-2, 2.905E-2, 2.515E-2, 2.247E-2, 1.837E-2, 1.606E-2, ;...
-6.045E+1, 1.638E+1, 6.503 , 1.681 , 6.379E-1, 3.061E-1, 1.671E-1, 6.446E-2, 3.260E-2, 1.246E-2, 9.410E-3, 1.003E-2, 1.190E-2, 1.375E-2, 1.544E-2, 1.826E-2, 2.047E-2, 2.424E-2, 2.647E-2, 2.868E-2, 2.951E-2, 2.971E-2, 2.959E-2, 2.890E-2, 2.797E-2, 2.674E-2, 2.555E-2, 2.343E-2, 2.019E-2, 1.790E-2, 1.622E-2, 1.493E-2, 1.308E-2, 1.183E-2, 9.948E-3, 8.914E-3;...
-2.335E+2, 6.629E+1, 2.672E+1, 7.249 , 2.840 , 1.364 , 7.477E-1, 2.888E-1, 1.387E-1, 3.910E-2, 1.885E-2, 1.138E-2, 1.131E-2, 1.237E-2, 1.361E-2, 1.588E-2, 1.776E-2, 2.098E-2, 2.290E-2, 2.481E-2, 2.552E-2, 2.569E-2, 2.559E-2, 2.499E-2, 2.419E-2, 2.312E-2, 2.210E-2, 2.028E-2, 1.753E-2, 1.561E-2, 1.422E-2, 1.316E-2, 1.167E-2, 1.066E-2, 9.182E-3, 8.385E-3;...
-6.035E+2, 1.791E+2, 7.422E+1, 2.090E+1, 8.367 , 4.081 , 2.260 , 8.839E-1, 4.255E-1, 1.143E-1, 4.780E-2, 1.898E-2, 1.438E-2, 1.401E-2, 1.468E-2, 1.658E-2, 1.836E-2, 2.157E-2, 2.353E-2, 2.548E-2, 2.620E-2, 2.639E-2, 2.627E-2, 2.565E-2, 2.483E-2, 2.373E-2, 2.268E-2, 2.083E-2, 1.806E-2, 1.617E-2, 1.479E-2, 1.377E-2, 1.233E-2, 1.138E-2, 1.001E-2, 9.294E-3;...
-1.228E+3, 3.759E+2, 1.591E+2, 4.617E+1, 1.886E+1, 9.332 , 5.223 , 2.072 , 1.006 , 2.698E-1, 1.084E-1, 3.506E-2, 2.084E-2, 1.737E-2, 1.680E-2, 1.785E-2, 1.940E-2, 2.255E-2, 2.453E-2, 2.654E-2, 2.731E-2, 2.749E-2, 2.737E-2, 2.671E-2, 2.586E-2, 2.472E-2, 2.362E-2, 2.171E-2, 1.889E-2, 1.698E-2, 1.562E-2, 1.461E-2, 1.322E-2, 1.232E-2, 1.104E-2, 1.039E-2;...
-2.209E+3, 6.990E+2, 3.016E+2, 8.963E+1, 3.723E+1, 1.866E+1, 1.054E+1, 4.242 , 2.078 , 5.627E-1, 2.238E-1, 6.614E-2, 3.343E-2, 2.397E-2, 2.098E-2, 2.037E-2, 2.147E-2, 2.449E-2, 2.655E-2, 2.870E-2, 2.950E-2, 2.969E-2, 2.956E-2, 2.885E-2, 2.792E-2, 2.669E-2, 2.551E-2, 2.345E-2, 2.048E-2, 1.849E-2, 1.710E-2, 1.607E-2, 1.468E-2, 1.380E-2, 1.258E-2, 1.198E-2;...
-3.306E+3, 1.080E+3, 4.755E+2, 1.447E+2, 6.094E+1, 3.086E+1, 1.759E+1, 7.170 , 3.545 , 9.715E-1, 3.867E-1, 1.099E-1, 5.051E-2, 3.217E-2, 2.548E-2, 2.211E-2, 2.231E-2, 2.472E-2, 2.665E-2, 2.873E-2, 2.952E-2, 2.969E-2, 2.956E-2, 2.886E-2, 2.792E-2, 2.669E-2, 2.550E-2, 2.347E-2, 2.057E-2, 1.867E-2, 1.734E-2, 1.639E-2, 1.512E-2, 1.434E-2, 1.332E-2, 1.285E-2;...
-4.576E+3, 1.545E+3, 6.926E+2, 2.158E+2, 9.221E+1, 4.715E+1, 2.708E+1, 1.116E+1, 5.565 , 1.545 , 6.179E-1, 1.729E-1, 7.530E-2, 4.414E-2, 3.207E-2, 2.468E-2, 2.355E-2, 2.506E-2, 2.679E-2, 2.877E-2, 2.953E-2, 2.971E-2, 2.957E-2, 2.887E-2, 2.794E-2, 2.669E-2, 2.551E-2, 2.350E-2, 2.066E-2, 1.882E-2, 1.757E-2, 1.668E-2, 1.553E-2, 1.483E-2, 1.396E-2, 1.360E-2;...
-5.615E+3, 1.969E+3, 9.005E+2, 2.870E+2, 1.244E+2, 6.424E+1, 3.716E+1, 1.548E+1, 7.776 , 2.186 , 8.796E-1, 2.451E-1, 1.036E-1, 5.747E-2, 3.903E-2, 2.676E-2, 2.394E-2, 2.417E-2, 2.554E-2, 2.729E-2, 2.800E-2, 2.815E-2, 2.801E-2, 2.734E-2, 2.645E-2, 2.527E-2, 2.416E-2, 2.226E-2, 1.964E-2, 1.797E-2, 1.685E-2, 1.607E-2, 1.508E-2, 1.451E-2, 1.382E-2, 1.357E-2;...
-7.326E+3, 2.645E+3, 1.234E+3, 4.021E+2, 1.767E+2, 9.214E+1, 5.369E+1, 2.260E+1, 1.143E+1, 3.253 , 1.317 , 3.676E-1, 1.528E-1, 8.182E-2, 5.287E-2, 3.273E-2, 2.733E-2, 2.590E-2, 2.697E-2, 2.862E-2, 2.931E-2, 2.946E-2, 2.930E-2, 2.860E-2, 2.766E-2, 2.641E-2, 2.526E-2, 2.330E-2, 2.061E-2, 1.894E-2, 1.784E-2, 1.709E-2, 1.616E-2, 1.564E-2, 1.508E-2, 1.491E-2;...
-6.522E+2, 3.151E+3, 1.504E+3, 5.023E+2, 2.238E+2, 1.178E+2, 6.915E+1, 2.941E+1, 1.499E+1, 4.313 , 1.759 , 4.928E-1, 2.031E-1, 1.063E-1, 6.625E-2, 3.761E-2, 2.931E-2, 2.579E-2, 2.635E-2, 2.771E-2, 2.833E-2, 2.845E-2, 2.830E-2, 2.760E-2, 2.669E-2, 2.549E-2, 2.437E-2, 2.249E-2, 1.997E-2, 1.842E-2, 1.743E-2, 1.675E-2, 1.595E-2, 1.552E-2, 1.508E-2, 1.496E-2;...
-9.203E+2, 3.918E+3, 1.899E+3, 6.499E+2, 2.937E+2, 1.561E+2, 9.227E+1, 3.965E+1, 2.036E+1, 5.925 , 2.432 , 6.855E-1, 2.815E-1, 1.451E-1, 8.820E-2, 4.671E-2, 3.410E-2, 2.766E-2, 2.761E-2, 2.871E-2, 2.928E-2, 2.938E-2, 2.921E-2, 2.848E-2, 2.753E-2, 2.629E-2, 2.514E-2, 2.322E-2, 2.067E-2, 1.915E-2, 1.819E-2, 1.756E-2, 1.683E-2, 1.646E-2, 1.614E-2, 1.609E-2;...
-1.183E+3, 4.001E+2, 2.204E+3, 7.732E+2, 3.545E+2, 1.902E+2, 1.133E+2, 4.918E+1, 2.543E+1, 7.487 , 3.094 , 8.778E-1, 3.601E-1, 1.840E-1, 1.099E-1, 5.511E-2, 3.794E-2, 2.827E-2, 2.745E-2, 2.816E-2, 2.862E-2, 2.868E-2, 2.851E-2, 2.778E-2, 2.686E-2, 2.565E-2, 2.451E-2, 2.266E-2, 2.024E-2, 1.882E-2, 1.795E-2, 1.739E-2, 1.678E-2, 1.650E-2, 1.631E-2, 1.633E-2;...
-1.567E+3, 5.331E+2, 2.669E+3, 9.516E+2, 4.427E+2, 2.400E+2, 1.439E+2, 6.313E+1, 3.289E+1, 9.794 , 4.076 , 1.164 , 4.782E-1, 2.430E-1, 1.434E-1, 6.896E-2, 4.513E-2, 3.086E-2, 2.905E-2, 2.932E-2, 2.968E-2, 2.971E-2, 2.951E-2, 2.875E-2, 2.778E-2, 2.652E-2, 2.535E-2, 2.345E-2, 2.101E-2, 1.963E-2, 1.878E-2, 1.827E-2, 1.773E-2, 1.753E-2, 1.746E-2, 1.757E-2;...
-1.910E+3, 6.522E+2, 2.996E+2, 1.074E+3, 5.079E+2, 2.782E+2, 1.682E+2, 7.457E+1, 3.912E+1, 1.179E+1, 4.939 , 1.422 , 5.850E-1, 2.965E-1, 1.735E-1, 8.083E-2, 5.068E-2, 3.188E-2, 2.899E-2, 2.870E-2, 2.892E-2, 2.891E-2, 2.869E-2, 2.793E-2, 2.698E-2, 2.575E-2, 2.462E-2, 2.279E-2, 2.049E-2, 1.921E-2, 1.846E-2, 1.801E-2, 1.760E-2, 1.747E-2, 1.754E-2, 1.771E-2;...
-2.426E+3, 8.314E+2, 3.828E+2, 1.265E+3, 6.066E+2, 3.360E+2, 2.046E+2, 9.171E+1, 4.847E+1, 1.477E+1, 6.235 , 1.809 , 7.466E-1, 3.779E-1, 2.199E-1, 1.000E-1, 6.052E-2, 3.516E-2, 3.080E-2, 2.983E-2, 2.991E-2, 2.984E-2, 2.959E-2, 2.878E-2, 2.780E-2, 2.652E-2, 2.535E-2, 2.349E-2, 2.118E-2, 1.993E-2, 1.923E-2, 1.884E-2, 1.850E-2, 1.845E-2, 1.864E-2, 1.889E-2;...
-2.829E+3, 9.742E+2, 4.494E+2, 1.361E+3, 6.626E+2, 3.711E+2, 2.282E+2, 1.034E+2, 5.510E+1, 1.700E+1, 7.227 , 2.114 , 8.756E-1, 4.433E-1, 2.570E-1, 1.148E-1, 6.745E-2, 3.639E-2, 3.067E-2, 2.898E-2, 2.887E-2, 2.874E-2, 2.847E-2, 2.767E-2, 2.671E-2, 2.549E-2, 2.436E-2, 2.258E-2, 2.043E-2, 1.931E-2, 1.871E-2, 1.839E-2, 1.819E-2, 1.824E-2, 1.861E-2, 1.899E-2;...
-3.180E+3, 1.102E+3, 5.093E+2, 1.682E+2, 6.979E+2, 3.953E+2, 2.449E+2, 1.125E+2, 6.038E+1, 1.886E+1, 8.074 , 2.382 , 9.907E-1, 5.020E-1, 2.904E-1, 1.280E-1, 7.344E-2, 3.703E-2, 2.998E-2, 2.757E-2, 2.727E-2, 2.708E-2, 2.679E-2, 2.601E-2, 2.510E-2, 2.394E-2, 2.288E-2, 2.123E-2, 1.927E-2, 1.827E-2, 1.777E-2, 1.753E-2, 1.742E-2, 1.754E-2, 1.800E-2, 1.842E-2;...
-4.053E+3, 1.415E+3, 6.563E+2, 2.174E+2, 8.304E+2, 4.752E+2, 2.974E+2, 1.383E+2, 7.490E+1, 2.370E+1, 1.023E+1, 3.045 , 1.272 , 6.454E-1, 3.730E-1, 1.628E-1, 9.161E-2, 4.346E-2, 3.378E-2, 3.015E-2, 2.959E-2, 2.929E-2, 2.895E-2, 2.807E-2, 2.707E-2, 2.581E-2, 2.467E-2, 2.290E-2, 2.084E-2, 1.985E-2, 1.935E-2, 1.914E-2, 1.910E-2, 1.928E-2, 1.983E-2, 2.029E-2;...
-4.861E+3, 1.710E+3, 7.966E+2, 2.650E+2, 1.197E+2, 5.373E+2, 3.387E+2, 1.600E+2, 8.744E+1, 2.804E+1, 1.220E+1, 3.665 , 1.538 , 7.822E-1, 4.520E-1, 1.958E-1, 1.085E-1, 4.876E-2, 3.639E-2, 3.146E-2, 3.060E-2, 3.019E-2, 2.979E-2, 2.884E-2, 2.780E-2, 2.650E-2, 2.532E-2, 2.352E-2, 2.147E-2, 2.052E-2, 2.007E-2, 1.992E-2, 1.997E-2, 2.022E-2, 2.088E-2, 2.140E-2;...
-5.231E+3, 1.853E+3, 8.672E+2, 2.896E+2, 1.311E+2, 5.436E+2, 3.474E+2, 1.661E+2, 9.175E+1, 2.988E+1, 1.311E+1, 3.975 , 1.677 , 8.552E-1, 4.944E-1, 2.132E-1, 1.167E-1, 4.998E-2, 3.586E-2, 2.997E-2, 2.887E-2, 2.837E-2, 2.795E-2, 2.703E-2, 2.603E-2, 2.480E-2, 2.370E-2, 2.202E-2, 2.016E-2, 1.933E-2, 1.897E-2, 1.887E-2, 1.900E-2, 1.929E-2, 2.000E-2, 2.052E-2;...
-5.860E+3, 2.091E+3, 9.824E+2, 3.295E+2, 1.494E+2, 5.657E+2, 3.691E+2, 1.793E+2, 1.001E+2, 3.311E+1, 1.465E+1, 4.488 , 1.904 , 9.737E-1, 5.634E-1, 2.422E-1, 1.312E-1, 5.393E-2, 3.726E-2, 3.007E-2, 2.864E-2, 2.804E-2, 2.756E-2, 2.661E-2, 2.561E-2, 2.439E-2, 2.330E-2, 2.166E-2, 1.989E-2, 1.913E-2, 1.884E-2, 1.879E-2, 1.899E-2, 1.933E-2, 2.013E-2, 2.067E-2;...
-6.483E+3, 2.336E+3, 1.102E+3, 3.713E+2, 1.688E+2, 9.089E+1, 3.841E+2, 1.908E+2, 1.077E+2, 3.627E+1, 1.620E+1, 5.015 , 2.140 , 1.098 , 6.364E-1, 2.731E-1, 1.469E-1, 5.821E-2, 3.879E-2, 3.019E-2, 2.843E-2, 2.770E-2, 2.717E-2, 2.618E-2, 2.518E-2, 2.396E-2, 2.289E-2, 2.130E-2, 1.961E-2, 1.892E-2, 1.869E-2, 1.869E-2, 1.896E-2, 1.937E-2, 2.022E-2, 2.079E-2;...
-7.388E+3, 2.687E+3, 1.272E+3, 4.305E+2, 1.961E+2, 1.057E+2, 4.027E+2, 2.087E+2, 1.193E+2, 4.093E+1, 1.846E+1, 5.780 , 2.482 , 1.278 , 7.420E-1, 3.182E-1, 1.701E-1, 6.536E-2, 4.211E-2, 3.160E-2, 2.938E-2, 2.849E-2, 2.788E-2, 2.680E-2, 2.576E-2, 2.450E-2, 2.340E-2, 2.178E-2, 2.011E-2, 1.947E-2, 1.929E-2, 1.933E-2, 1.970E-2, 2.016E-2, 2.112E-2, 2.174E-2;...
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-5.854E+3, 2.717E+3, 1.482E+3, 2.178E+3, 1.240E+3, 8.025E+2, 5.146E+2, 2.509E+2, 1.423E+2, 1.008E+2, 7.446E+1, 2.812E+1, 1.361E+1, 7.637 , 4.729 , 2.200 , 1.897 , 1.112 , 6.369E-1, 2.718E-1, 1.522E-1, 1.012E-1, 7.517E-2, 5.055E-2, 3.934E-2, 3.181E-2, 2.791E-2, 2.478E-2, 2.427E-2, 2.556E-2, 2.710E-2, 2.859E-2, 3.113E-2, 3.311E-2, 3.619E-2, 3.739E-2;...
-5.812E+3, 2.706E+3, 1.478E+3, 1.507E+3, 1.229E+3, 7.931E+2, 5.085E+2, 2.485E+2, 1.411E+2, 9.807E+1, 7.231E+1, 2.760E+1, 1.342E+1, 7.552 , 4.686 , 2.185 , 1.766 , 1.073 , 6.204E-1, 2.668E-1, 1.496E-1, 9.941E-2, 7.377E-2, 4.942E-2, 3.832E-2, 3.089E-2, 2.704E-2, 2.396E-2, 2.344E-2, 2.469E-2, 2.620E-2, 2.766E-2, 3.016E-2, 3.216E-2, 3.534E-2, 3.670E-2;...
-6.224E+3, 2.833E+3, 1.549E+3, 1.928E+3, 1.281E+3, 8.238E+2, 5.285E+2, 2.588E+2, 1.471E+2, 5.174E+1, 7.395E+1, 2.849E+1, 1.391E+1, 7.851 , 4.881 , 2.283 , 1.261 , 1.087 , 6.351E-1, 2.750E-1, 1.542E-1, 1.025E-1, 7.597E-2, 5.067E-2, 3.920E-2, 3.151E-2, 2.752E-2, 2.432E-2, 2.372E-2, 2.495E-2, 2.644E-2, 2.788E-2, 3.033E-2, 3.227E-2, 3.525E-2, 3.641E-2;...
-6.187E+3, 2.937E+3, 1.608E+3, 6.555E+2, 1.322E+3, 8.472E+2, 5.438E+2, 2.669E+2, 1.519E+2, 5.353E+1, 7.496E+1, 2.913E+1, 1.429E+1, 8.088 , 5.039 , 2.363 , 1.308 , 1.091 , 6.440E-1, 2.811E-1, 1.580E-1, 1.050E-1, 7.772E-2, 5.165E-2, 3.983E-2, 3.191E-2, 2.779E-2, 2.452E-2, 2.387E-2, 2.509E-2, 2.658E-2, 2.802E-2, 3.050E-2, 3.245E-2, 3.549E-2, 3.668E-2;...
-6.455E+3, 3.069E+3, 1.683E+3, 6.870E+2, 1.377E+3, 8.408E+2, 5.641E+2, 2.773E+2, 1.580E+2, 5.583E+1, 7.645E+1, 3.000E+1, 1.479E+1, 8.396 , 5.242 , 2.465 , 1.367 , 1.100 , 6.581E-1, 2.896E-1, 1.632E-1, 1.085E-1, 8.018E-2, 5.311E-2, 4.080E-2, 3.258E-2, 2.831E-2, 2.490E-2, 2.419E-2, 2.539E-2, 2.688E-2, 2.832E-2, 3.079E-2, 3.275E-2, 3.575E-2, 3.692E-2;...
-6.600E+3, 3.148E+3, 1.729E+3, 7.070E+2, 1.208E+3, 8.581E+2, 5.749E+2, 2.830E+2, 1.615E+2, 5.718E+1, 6.714E+1, 3.032E+1, 1.503E+1, 8.558 , 5.355 , 2.526 , 1.403 , 1.090 , 6.603E-1, 2.931E-1, 1.656E-1, 1.101E-1, 8.128E-2, 5.366E-2, 4.109E-2, 3.269E-2, 2.834E-2, 2.487E-2, 2.411E-2, 2.528E-2, 2.674E-2, 2.817E-2, 3.060E-2, 3.253E-2, 3.550E-2, 3.664E-2;...
-6.515E+3, 3.313E+3, 1.821E+3, 7.444E+2, 1.265E+3, 8.454E+2, 6.004E+2, 2.958E+2, 1.690E+2, 6.000E+1, 5.486E+1, 3.146E+1, 1.567E+1, 8.950 , 5.612 , 2.655 , 1.477 , 1.106 , 6.792E-1, 3.042E-1, 1.723E-1, 1.146E-1, 8.453E-2, 5.563E-2, 4.247E-2, 3.367E-2, 2.911E-2, 2.547E-2, 2.463E-2, 2.580E-2, 2.727E-2, 2.870E-2, 3.117E-2, 3.311E-2, 3.609E-2, 3.724E-2;...
-6.612E+3, 3.368E+3, 1.852E+3, 7.578E+2, 1.277E+3, 8.569E+2, 6.062E+2, 2.989E+2, 1.711E+2, 6.084E+1, 5.496E+1, 3.149E+1, 1.576E+1, 9.034 , 5.678 , 2.695 , 1.502 , 1.083 , 6.746E-1, 3.050E-1, 1.732E-1, 1.152E-1, 8.494E-2, 5.574E-2, 4.241E-2, 3.351E-2, 2.891E-2, 2.523E-2, 2.434E-2, 2.546E-2, 2.689E-2, 2.829E-2, 3.068E-2, 3.259E-2, 3.552E-2, 3.662E-2;...
-NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, 1 ;...
-NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, 1 ;...
-NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, 1 ;...
-NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, 1 ;...
-NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, 1 ;...
-NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, 1 ;...
-NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, 1 ;...
-NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, NaN, 1 ;...
-];
-end
-
-%--------------------------------------------------------------------------
-%% Hard-wire the table with description of each absorbtion edge
-% Z, Energy, mac low, mac high, meac low, meac high
-%--------------------------------------------------------------------------
-if (isempty(edges))
-edges = [ ...
- 11, 0.0010721, 5.429E+2, 6.435E+3, 5.410E+2, 6.320E+3;...
- 12, 0.001305 , 4.530E+2, 5.444E+3, 4.509E+2, 5.310E+3;...
- 13, 0.0015596, 3.621E+2, 3.957E+3, 3.600E+2, 3.829E+3;...
- 14, 0.0018389, 3.092E+2, 3.192E+3, 3.070E+2, 3.059E+3;...
- 15, 0.0021455, 2.494E+2, 2.473E+3, 2.473E+2, 2.343E+3;...
- 16, 0.002472 , 2.168E+2, 2.070E+3, 2.145E+2, 1.935E+3;...
- 17, 0.0028224, 1.774E+2, 1.637E+3, 1.752E+2, 1.506E+3;...
- 18, 0.0032029, 1.424E+2, 1.275E+3, 1.403E+2, 1.153E+3;...
- 19, 0.0036074, 1.327E+2, 1.201E+3, 1.306E+2, 1.065E+3;...
- 20, 0.0040381, 1.187E+2, 1.023E+3, 1.166E+2, 8.887E+2;...
- 21, 0.0044928, 9.687E+1, 8.148E+2, 9.490E+1, 6.911E+2;...
- 22, 0.0049664, 8.380E+1, 6.878E+2, 8.188E+1, 5.684E+2;...
- 23, 0.0054651, 7.277E+1, 5.870E+2, 7.090E+1, 4.717E+2;...
- 24, 0.0059892, 6.574E+1, 5.160E+2, 6.383E+1, 4.027E+2;...
- 25, 0.006539 , 5.803E+1, 4.520E+2, 5.619E+1, 3.415E+2;...
- 26, 0.007112 , 5.319E+1, 4.076E+2, 5.133E+1, 2.978E+2;...
- 27, 0.0077089, 4.710E+1, 3.555E+2, 4.530E+1, 2.507E+2;...
- 28, 0.0010081, 9.654E+3, 1.099E+4, 9.598E+3, 1.093E+4;...
- 28, 0.0083328, 4.428E+1, 3.294E+2, 4.242E+1, 2.240E+2;...
- 29, 0.0010961, 8.242E+3, 9.347E+3, 8.186E+3, 9.282E+3;...
- 29, 0.0089789, 3.829E+1, 2.784E+2, 3.652E+1, 1.824E+2;...
- 30, 0.0010197, 1.484E+3, 3.804E+3, 1.478E+3, 3.777E+3;...
- 30, 0.0010428, 6.518E+3, 8.274E+3, 6.464E+3, 8.202E+3;...
- 30, 0.0011936, 7.371E+3, 8.396E+3, 7.312E+3, 8.328E+3;...
- 30, 0.0096586, 3.505E+1, 2.536E+2, 3.332E+1, 1.599E+2;...
- 31, 0.0011154, 1.312E+3, 3.990E+3, 1.307E+3, 3.955E+3;...
- 31, 0.0011423, 5.664E+3, 7.405E+3, 5.611E+3, 7.332E+3;...
- 31, 0.0012977, 6.358E+3, 7.206E+3, 6.299E+3, 7.139E+3;...
- 31, 0.0103671, 3.099E+1, 2.214E+2, 2.936E+1, 1.344E+2;...
- 32, 0.0012167, 1.190E+3, 4.389E+3, 1.185E+3, 4.343E+3;...
- 32, 0.0012478, 4.974E+3, 6.698E+3, 4.922E+3, 6.622E+3;...
- 32, 0.0014143, 5.554E+3, 6.287E+3, 5.495E+3, 6.221E+3;...
- 32, 0.0111031, 2.811E+1, 1.981E+2, 2.653E+1, 1.157E+2;...
- 33, 0.0013231, 1.092E+3, 4.513E+3, 1.087E+3, 4.459E+3;...
- 33, 0.0013586, 4.452E+3, 6.093E+3, 4.398E+3, 6.015E+3;...
- 33, 0.0015265, 4.997E+3, 5.653E+3, 4.938E+3, 5.585E+3;...
- 33, 0.0118667, 2.577E+1, 1.792E+2, 2.425E+1, 1.008E+2;...
- 34, 0.0014358, 9.814E+2, 4.347E+3, 9.760E+2, 4.287E+3;...
- 34, 0.0014762, 3.907E+3, 5.186E+3, 3.855E+3, 5.112E+3;...
- 34, 0.0016539, 4.342E+3, 4.915E+3, 4.284E+3, 4.849E+3;...
- 34, 0.0126578, 2.318E+1, 1.589E+2, 2.173E+1, 8.599E+1;...
- 35, 0.0015499, 9.255E+2, 4.289E+3, 9.200E+2, 4.223E+3;...
- 35, 0.001596 , 3.587E+3, 5.097E+3, 3.534E+3, 5.014E+3;...
- 35, 0.001782 , 3.969E+3, 4.495E+3, 3.910E+3, 4.427E+3;...
- 35, 0.0134737, 2.176E+1, 1.471E+2, 2.033E+1, 7.668E+1;...
- 36, 0.0016749, 8.361E+2, 3.909E+3, 8.305E+2, 3.842E+3;...
- 36, 0.0017272, 3.166E+3, 4.566E+3, 3.114E+3, 4.484E+3;...
- 36, 0.001921 , 3.482E+3, 3.948E+3, 3.425E+3, 3.882E+3;...
- 36, 0.0143256, 1.971E+1, 1.313E+2, 1.836E+1, 6.604E+1;...
- 37, 0.0018044, 7.782E+2, 3.096E+3, 7.726E+2, 3.040E+3;...
- 37, 0.0018639, 2.861E+3, 3.957E+3, 2.810E+3, 3.880E+3;...
- 37, 0.0020651, 3.153E+3, 3.606E+3, 3.096E+3, 3.540E+3;...
- 37, 0.0151997, 1.842E+1, 1.208E+2, 1.709E+1, 5.864E+1;...
- 38, 0.0019396, 7.207E+2, 2.864E+3, 7.152E+2, 2.807E+3;...
- 38, 0.0020068, 2.571E+3, 3.577E+3, 2.521E+3, 3.501E+3;...
- 38, 0.0022163, 2.842E+3, 3.241E+3, 2.786E+3, 3.176E+3;...
- 38, 0.0161046, 1.714E+1, 1.108E+2, 1.585E+1, 5.200E+1;...
- 39, 0.00208 , 6.738E+2, 2.627E+3, 6.682E+2, 2.569E+3;...
- 39, 0.0021555, 2.342E+3, 3.264E+3, 2.292E+3, 3.187E+3;...
- 39, 0.0023725, 2.597E+3, 2.962E+3, 2.540E+3, 2.897E+3;...
- 39, 0.0170384, 1.612E+1, 1.029E+2, 1.486E+1, 4.672E+1;...
- 40, 0.0022223, 6.258E+2, 2.392E+3, 6.201E+2, 2.335E+3;...
- 40, 0.0023067, 2.120E+3, 2.953E+3, 2.071E+3, 2.878E+3;...
- 40, 0.0025316, 2.359E+3, 2.691E+3, 2.303E+3, 2.627E+3;...
- 40, 0.0179976, 1.501E+1, 9.470E+1, 1.380E+1, 4.164E+1;...
- 41, 0.0023705, 5.844E+2, 2.181E+3, 5.786E+2, 2.125E+3;...
- 41, 0.0024647, 1.935E+3, 2.694E+3, 1.886E+3, 2.619E+3;...
- 41, 0.0026977, 2.161E+3, 2.470E+3, 2.104E+3, 2.405E+3;...
- 41, 0.0189856, 1.409E+1, 8.784E+1, 1.291E+1, 3.746E+1;...
- 42, 0.0025202, 5.415E+2, 1.979E+3, 5.358E+2, 1.924E+3;...
- 42, 0.0026251, 1.750E+3, 2.433E+3, 1.703E+3, 2.360E+3;...
- 42, 0.0028655, 1.961E+3, 2.243E+3, 1.906E+3, 2.179E+3;...
- 42, 0.0199995, 1.308E+1, 8.055E+1, 1.193E+1, 3.293E+1;...
- 43, 0.0026769, 5.072E+2, 1.812E+3, 5.014E+2, 1.758E+3;...
- 43, 0.0027932, 1.602E+3, 2.223E+3, 1.555E+3, 2.151E+3;...
- 43, 0.0030425, 1.800E+3, 2.059E+3, 1.745E+3, 1.995E+3;...
- 43, 0.021044 , 1.229E+1, 7.481E+1, 1.117E+1, 3.014E+1;...
- 44, 0.0028379, 4.704E+2, 1.644E+3, 4.646E+2, 1.591E+3;...
- 44, 0.0029669, 1.452E+3, 2.317E+3, 1.407E+3, 2.233E+3;...
- 44, 0.003224 , 1.638E+3, 1.874E+3, 1.584E+3, 1.811E+3;...
- 44, 0.0221172, 1.143E+1, 6.876E+1, 1.035E+1, 2.700E+1;...
- 45, 0.0030038, 4.427E+2, 1.513E+3, 4.368E+2, 1.461E+3;...
- 45, 0.0031461, 1.337E+3, 1.847E+3, 1.292E+3, 1.777E+3;...
- 45, 0.0034119, 1.512E+3, 1.731E+3, 1.458E+3, 1.669E+3;...
- 45, 0.0232199, 1.079E+1, 6.414E+1, 9.736 , 2.458E+1;...
- 46, 0.0031733, 4.106E+2, 1.355E+3, 4.047E+2, 1.305E+3;...
- 46, 0.0033303, 1.215E+3, 1.664E+3, 1.171E+3, 1.597E+3;...
- 46, 0.0036043, 1.379E+3, 1.582E+3, 1.326E+3, 1.520E+3;...
- 46, 0.0243503, 1.003E+1, 5.898E+1, 9.016 , 2.208E+1;...
- 47, 0.0033511, 3.887E+2, 1.274E+3, 3.827E+2, 1.223E+3;...
- 47, 0.0035237, 1.126E+3, 1.547E+3, 1.082E+3, 1.479E+3;...
- 47, 0.0038058, 1.282E+3, 1.468E+3, 1.229E+3, 1.406E+3;...
- 47, 0.025514 , 9.527 , 5.539E+1, 8.534 , 2.031E+1;...
- 48, 0.0035375, 3.575E+2, 1.152E+3, 3.517E+2, 1.103E+3;...
- 48, 0.003727 , 1.013E+3, 1.389E+3, 9.715E+2, 1.324E+3;...
- 48, 0.004018 , 1.157E+3, 1.324E+3, 1.106E+3, 1.264E+3;...
- 48, 0.0267112, 8.809 , 5.065E+1, 7.863 , 1.821E+1;...
- 49, 0.0037301, 3.356E+2, 1.046E+3, 3.298E+2, 9.989E+2;...
- 49, 0.003938 , 9.313E+2, 1.261E+3, 8.905E+2, 1.199E+3;...
- 49, 0.0042375, 1.066E+3, 1.223E+3, 1.016E+3, 1.164E+3;...
- 49, 0.0279399, 8.316 , 4.733E+1, 7.395 , 1.670E+1;...
- 50, 0.0039288, 3.114E+2, 9.285E+2, 3.058E+2, 8.845E+2;...
- 50, 0.0041561, 8.469E+2, 1.145E+3, 8.074E+2, 1.084E+3;...
- 50, 0.0044647, 9.712E+2, 1.117E+3, 9.221E+2, 1.059E+3;...
- 50, 0.0292001, 7.760 , 4.360E+1, 6.876 , 1.514E+1;...
- 51, 0.0041322, 2.918E+2, 8.691E+2, 2.863E+2, 8.252E+2;...
- 51, 0.0043804, 7.776E+2, 1.050E+3, 7.392E+2, 9.906E+2;...
- 51, 0.0046983, 8.939E+2, 1.029E+3, 8.457E+2, 9.725E+2;...
- 51, 0.0304912, 7.307 , 4.073E+1, 6.452 , 1.391E+1;...
- 52, 0.001006 , 8.326E+3, 8.684E+3, 8.311E+3, 8.668E+3;...
- 52, 0.0043414, 2.678E+2, 7.882E+2, 2.625E+2, 7.460E+2;...
- 52, 0.004612 , 6.995E+2, 9.445E+2, 6.629E+2, 8.880E+2;...
- 52, 0.0049392, 8.062E+2, 9.292E+2, 7.600E+2, 8.744E+2;...
- 52, 0.0318138, 6.738 , 3.719E+1, 5.929 , 1.251E+1;...
- 53, 0.0010721, 7.863E+3, 8.198E+3, 7.847E+3, 8.181E+3;...
- 53, 0.0045571, 2.592E+2, 7.550E+2, 2.537E+2, 7.121E+2;...
- 53, 0.0048521, 6.636E+2, 8.943E+2, 6.270E+2, 8.375E+2;...
- 53, 0.0051881, 7.665E+2, 8.837E+2, 7.198E+2, 8.283E+2;...
- 53, 0.0331694, 6.553 , 3.582E+1, 5.744 , 1.188E+1;...
- 54, 0.001149 , 7.035E+3, 7.338E+3, 7.019E+3, 7.321E+3;...
- 54, 0.0047822, 2.408E+2, 6.941E+2, 2.355E+2, 6.524E+2;...
- 54, 0.0051037, 6.044E+2, 8.181E+2, 5.693E+2, 7.630E+2;...
- 54, 0.0054528, 6.991E+2, 8.064E+2, 6.539E+2, 7.527E+2;...
- 54, 0.0345614, 6.129 , 3.316E+1, 5.352 , 1.086E+1;...
- 55, 0.001065 , 8.214E+3, 8.685E+3, 8.194E+3, 8.663E+3;...
- 55, 0.0012171, 6.584E+3, 6.888E+3, 6.567E+3, 6.870E+3;...
- 55, 0.0050119, 2.290E+2, 6.674E+2, 2.237E+2, 6.248E+2;...
- 55, 0.0053594, 5.645E+2, 7.692E+2, 5.299E+2, 7.142E+2;...
- 55, 0.0057143, 6.556E+2, 7.547E+2, 6.108E+2, 7.015E+2;...
- 55, 0.0359846, 5.863 , 3.143E+1, 5.102 , 1.017E+1;...
- 56, 0.0010622, 7.465E+3, 8.547E+3, 7.445E+3, 8.524E+3;...
- 56, 0.0011367, 7.404E+3, 7.837E+3, 7.384E+3, 7.815E+3;...
- 56, 0.0012928, 5.985E+3, 6.255E+3, 5.968E+3, 6.237E+3;...
- 56, 0.005247 , 2.135E+2, 6.098E+2, 2.084E+2, 5.689E+2;...
- 56, 0.0056236, 5.169E+2, 7.016E+2, 4.835E+2, 6.486E+2;...
- 56, 0.0059888, 6.013E+2, 6.930E+2, 5.577E+2, 6.412E+2;...
- 56, 0.0374406, 5.498 , 2.919E+1, 4.768 , 9.346 ;...
- 57, 0.0011234, 7.000E+3, 8.025E+3, 6.979E+3, 8.001E+3;...
- 57, 0.0012044, 6.911E+3, 7.321E+3, 6.890E+3, 7.298E+3;...
- 57, 0.0013613, 5.652E+3, 5.905E+3, 5.634E+3, 5.886E+3;...
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- 58, 0.040443 , 5.066 , 2.635E+1, 4.359 , 8.272 ;...
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- 80, 0.0831023, 2.055 , 8.464 , 1.607 , 2.384 ;...
- 81, 0.0023893, 8.352E+2, 1.136E+3, 8.240E+2, 1.115E+3;...
- 81, 0.0024851, 2.049E+3, 2.364E+3, 1.999E+3, 2.303E+3;...
- 81, 0.0029566, 1.958E+3, 2.267E+3, 1.910E+3, 2.210E+3;...
- 81, 0.0034157, 1.591E+3, 1.687E+3, 1.553E+3, 1.647E+3;...
- 81, 0.0037041, 1.392E+3, 1.452E+3, 1.360E+3, 1.419E+3;...
- 81, 0.0126575, 6.957E+1, 1.693E+2, 6.521E+1, 1.357E+2;...
- 81, 0.0146979, 1.139E+2, 1.572E+2, 9.356E+1, 1.207E+2;...
- 81, 0.0153467, 1.416E+2, 1.632E+2, 1.097E+2, 1.254E+2;...
- 81, 0.0855304, 1.976 , 8.046 , 1.539 , 2.264 ;...
- 82, 0.002484 , 8.006E+2, 1.397E+3, 7.895E+2, 1.366E+3;...
- 82, 0.0025856, 1.944E+3, 2.458E+3, 1.895E+3, 2.390E+3;...
- 82, 0.0030664, 1.857E+3, 2.146E+3, 1.808E+3, 2.090E+3;...
- 82, 0.0035542, 1.496E+3, 1.585E+3, 1.459E+3, 1.546E+3;...
- 82, 0.0038507, 1.311E+3, 1.368E+3, 1.279E+3, 1.335E+3;...
- 82, 0.0130352, 6.701E+1, 1.621E+2, 6.270E+1, 1.291E+2;...
- 82, 0.0152 , 1.078E+2, 1.485E+2, 8.807E+1, 1.131E+2;...
- 82, 0.0158608, 1.344E+2, 1.548E+2, 1.032E+2, 1.180E+2;...
- 82, 0.0880045, 1.910 , 7.683 , 1.482 , 2.160 ;...
- 83, 0.0025796, 7.724E+2, 1.777E+3, 7.612E+2, 1.731E+3;...
- 83, 0.0026876, 1.852E+3, 2.576E+3, 1.802E+3, 2.500E+3;...
- 83, 0.0031769, 1.774E+3, 2.048E+3, 1.725E+3, 1.992E+3;...
- 83, 0.0036963, 1.415E+3, 1.498E+3, 1.378E+3, 1.460E+3;...
- 83, 0.0039991, 1.243E+3, 1.297E+3, 1.211E+3, 1.264E+3;...
- 83, 0.0134186, 6.491E+1, 1.560E+2, 6.064E+1, 1.234E+2;...
- 83, 0.0157111, 1.027E+2, 1.416E+2, 8.346E+1, 1.069E+2;...
- 83, 0.0163875, 1.282E+2, 1.478E+2, 9.769E+1, 1.116E+2;...
- 83, 0.0905259, 1.856 , 7.380 , 1.434 , 2.073 ;...
- 84, 0.002683 , 7.482E+2, 2.206E+3, 7.369E+2, 2.142E+3;...
- 84, 0.002798 , 1.775E+3, 2.711E+3, 1.726E+3, 2.625E+3;...
- 84, 0.0033019, 1.693E+3, 1.956E+3, 1.645E+3, 1.900E+3;...
- 84, 0.0038541, 1.339E+3, 1.419E+3, 1.303E+3, 1.381E+3;...
- 84, 0.0041494, 1.190E+3, 1.242E+3, 1.158E+3, 1.209E+3;...
- 84, 0.0138138, 6.337E+1, 1.513E+2, 5.910E+1, 1.189E+2;...
- 84, 0.0162443, 9.849E+1, 1.361E+2, 7.965E+1, 1.019E+2;...
- 84, 0.0169393, 1.232E+2, 1.420E+2, 9.308E+1, 1.063E+2;...
- 84, 0.093105 , 1.820 , 7.140 , 1.400 , 2.005 ;...
- 85, 0.001042 , 5.435E+3, 5.551E+3, 5.420E+3, 5.537E+3;...
- 85, 0.0027867, 7.225E+2, 2.431E+3, 7.112E+2, 2.355E+3;...
- 85, 0.0029087, 1.686E+3, 2.763E+3, 1.638E+3, 2.671E+3;...
- 85, 0.003426 , 1.614E+3, 1.866E+3, 1.566E+3, 1.811E+3;...
- 85, 0.004008 , 1.269E+3, 1.345E+3, 1.233E+3, 1.308E+3;...
- 85, 0.004317 , 1.126E+3, 1.175E+3, 1.095E+3, 1.142E+3;...
- 85, 0.0142135, 6.162E+1, 1.461E+2, 5.738E+1, 1.140E+2;...
- 85, 0.0167847, 9.417E+1, 1.302E+2, 7.576E+1, 9.670E+1;...
- 85, 0.017493 , 1.181E+2, 1.360E+2, 8.847E+1, 1.010E+2;...
- 85, 0.0957299, 1.777 , 6.895 , 1.361 , 1.935 ;...
- 86, 0.001097 , 4.909E+3, 5.013E+3, 4.895E+3, 5.000E+3;...
- 86, 0.0028924, 6.634E+2, 2.319E+3, 6.526E+2, 2.243E+3;...
- 86, 0.0030215, 1.524E+3, 2.470E+3, 1.479E+3, 2.384E+3;...
- 86, 0.003538 , 1.479E+3, 1.710E+3, 1.433E+3, 1.657E+3;...
- 86, 0.004159 , 1.148E+3, 1.217E+3, 1.115E+3, 1.182E+3;...
- 86, 0.004482 , 1.017E+3, 1.061E+3, 9.877E+2, 1.031E+3;...
- 86, 0.0146194, 5.697E+1, 1.344E+2, 5.296E+1, 1.042E+2;...
- 86, 0.0173371, 8.557E+1, 1.185E+2, 6.851E+1, 8.724E+1;...
- 86, 0.018049 , 1.077E+2, 1.241E+2, 8.002E+1, 9.130E+1;...
- 86, 0.098404 , 1.649 , 6.371 , 1.258 , 1.779 ;...
- 87, 0.001153 , 4.673E+3, 4.772E+3, 4.659E+3, 4.758E+3;...
- 87, 0.0029999, 6.414E+2, 1.995E+3, 6.306E+2, 1.929E+3;...
- 87, 0.0031362, 1.449E+3, 2.255E+3, 1.405E+3, 2.175E+3;...
- 87, 0.003663 , 1.415E+3, 1.641E+3, 1.370E+3, 1.588E+3;...
- 87, 0.004327 , 1.086E+3, 1.153E+3, 1.053E+3, 1.118E+3;...
- 87, 0.004652 , 9.666E+2, 1.008E+3, 9.377E+2, 9.780E+2;...
- 87, 0.0150312, 5.544E+1, 1.304E+2, 5.146E+1, 1.003E+2;...
- 87, 0.0179065, 8.184E+1, 1.137E+2, 6.521E+1, 8.299E+1;...
- 87, 0.018639 , 1.031E+2, 1.187E+2, 7.602E+1, 8.666E+1;...
- 87, 0.101137 , 1.610 , 6.089 , 1.224 , 1.710 ;...
- 88, 0.0010576, 5.602E+3, 5.683E+3, 5.588E+3, 5.669E+3;...
- 88, 0.0012084, 4.424E+3, 4.516E+3, 4.411E+3, 4.502E+3;...
- 88, 0.0031049, 6.169E+2, 1.715E+3, 6.061E+2, 1.657E+3;...
- 88, 0.0032484, 1.374E+3, 2.039E+3, 1.331E+3, 1.965E+3;...
- 88, 0.0037918, 1.342E+3, 1.558E+3, 1.297E+3, 1.506E+3;...
- 88, 0.0044895, 1.024E+3, 1.086E+3, 9.917E+2, 1.052E+3;...
- 88, 0.004822 , 9.129E+2, 9.522E+2, 8.846E+2, 9.228E+2;...
- 88, 0.0154444, 5.355E+1, 1.253E+2, 4.962E+1, 9.581E+1;...
- 88, 0.0184843, 7.766E+1, 1.081E+2, 6.160E+1, 7.835E+1;...
- 88, 0.0192367, 9.799E+1, 1.128E+2, 7.175E+1, 8.172E+1;...
- 88, 0.103922 , 1.560 , 5.826 , 1.181 , 1.638 ;...
- 89, 0.00108 , 5.622E+3, 5.702E+3, 5.608E+3, 5.688E+3;...
- 89, 0.001269 , 4.203E+3, 4.289E+3, 4.190E+3, 4.275E+3;...
- 89, 0.003219 , 5.959E+2, 1.537E+3, 5.851E+2, 1.485E+3;...
- 89, 0.0033702, 1.307E+3, 1.892E+3, 1.264E+3, 1.822E+3;...
- 89, 0.003909 , 1.296E+3, 1.504E+3, 1.252E+3, 1.453E+3;...
- 89, 0.004656 , 9.745E+2, 1.034E+3, 9.428E+2, 1.000E+3;...
- 89, 0.005002 , 8.678E+2, 9.051E+2, 8.399E+2, 8.761E+2;...
- 89, 0.015871 , 5.213E+1, 1.214E+2, 4.823E+1, 9.224E+1;...
- 89, 0.0190832, 7.426E+1, 1.036E+2, 5.865E+1, 7.448E+1;...
- 89, 0.01984 , 9.403E+1, 1.082E+2, 6.831E+1, 7.774E+1;...
- 89, 0.106756 , 1.525 , 5.622 , 1.150 , 1.582 ;...
- 90, 0.0011683, 4.976E+3, 5.048E+3, 4.962E+3, 5.034E+3;...
- 90, 0.0013295, 3.937E+3, 4.017E+3, 3.924E+3, 4.003E+3;...
- 90, 0.003332 , 5.671E+2, 1.394E+3, 5.565E+2, 1.346E+3;...
- 90, 0.0034908, 1.226E+3, 1.749E+3, 1.185E+3, 1.683E+3;...
- 90, 0.0040461, 1.217E+3, 1.415E+3, 1.174E+3, 1.364E+3;...
- 90, 0.0048304, 9.103E+2, 9.655E+2, 8.797E+2, 9.330E+2;...
- 90, 0.0051823, 8.129E+2, 8.477E+2, 7.859E+2, 8.196E+2;...
- 90, 0.0163003, 4.991E+1, 1.156E+2, 4.611E+1, 8.732E+1;...
- 90, 0.0196932, 6.984E+1, 9.527E+1, 5.492E+1, 6.836E+1;...
- 90, 0.0204721, 8.851E+1, 1.018E+2, 6.383E+1, 7.259E+1;...
- 90, 0.109651 , 1.465 , 5.336 , 1.100 , 1.502 ;...
- 91, 0.0010067, 6.451E+3, 6.868E+3, 6.437E+3, 6.853E+3;...
- 91, 0.0012243, 4.794E+3, 4.863E+3, 4.780E+3, 4.848E+3;...
- 91, 0.0013871, 3.815E+3, 3.891E+3, 3.801E+3, 3.877E+3;...
- 91, 0.0034418, 5.548E+2, 1.363E+3, 5.440E+2, 1.314E+3;...
- 91, 0.0036112, 1.185E+3, 1.695E+3, 1.144E+3, 1.628E+3;...
- 91, 0.0041738, 1.182E+3, 1.374E+3, 1.139E+3, 1.324E+3;...
- 91, 0.0050009, 8.755E+2, 9.288E+2, 8.450E+2, 8.964E+2;...
- 91, 0.0053669, 7.810E+2, 8.144E+2, 7.541E+2, 7.864E+2;...
- 91, 0.0167331, 4.903E+1, 1.130E+2, 4.522E+1, 8.483E+1;...
- 91, 0.0203137, 6.747E+1, 9.452E+1, 5.284E+1, 6.704E+1;...
- 91, 0.0211046, 8.576E+1, 9.861E+1, 6.153E+1, 6.990E+1;...
- 91, 0.112601 , 1.445 , 5.198 , 1.081 , 1.466 ;...
- 92, 0.0010449, 6.127E+3, 6.519E+3, 6.112E+3, 6.504E+3;...
- 92, 0.0012726, 4.526E+3, 4.589E+3, 4.511E+3, 4.575E+3;...
- 92, 0.0014408, 3.598E+3, 3.668E+3, 3.584E+3, 3.654E+3;...
- 92, 0.0035517, 5.257E+2, 1.266E+3, 5.151E+2, 1.220E+3;...
- 92, 0.0037276, 1.112E+3, 1.582E+3, 1.072E+3, 1.517E+3;...
- 92, 0.0043034, 1.110E+3, 1.292E+3, 1.068E+3, 1.242E+3;...
- 92, 0.0051822, 8.118E+2, 8.611E+2, 7.825E+2, 8.301E+2;...
- 92, 0.005548 , 7.282E+2, 7.592E+2, 7.022E+2, 7.322E+2;...
- 92, 0.0171663, 4.663E+1, 1.070E+2, 4.293E+1, 7.980E+1;...
- 92, 0.0209476, 6.300E+1, 8.838E+1, 4.914E+1, 6.222E+1;...
- 92, 0.0217574, 8.023E+1, 9.222E+1, 5.715E+1, 6.487E+1;...
- 92, 0.115606 , 1.378 , 4.893 , 1.027 , 1.382 ;...
- 93, 1.087E-3 , 6.00E+3, 6.38E+3, NaN, NaN;...
- 93, 1.328E-3 , 4.38E+3, 4.44E+3, NaN, NaN;...
- 93, 1.501E-3 , 3.49E+3, 3.55E+3, NaN, NaN;...
- 93, 3.666E-3 , 5.15E+2, 1.22E+3, NaN, NaN;...
- 93, 3.850E-3 , 1.08E+3, 1.52E+3, NaN, NaN;...
- 93, 4.435E-3 , 1.08E+3, 1.26E+3, NaN, NaN;...
- 93, 5.366E-3 , 7.80E+2, 8.27E+2, NaN, NaN;...
- 93, 5.723E-3 , 7.06E+2, 7.36E+2, NaN, NaN;...
- 93, 1.761E-2 , 4.59E+1, 1.05E+2, NaN, NaN;...
- 93, 2.160E-2 , 6.08E+1, 8.55E+1, NaN, NaN;...
- 93, 2.243E-2 , 7.76E+1, 8.92E+1, NaN, NaN;...
- 93, 1.187E-1 , 1.36 , 4.77 , NaN, NaN;...
- 94, 1.115E-3 , 5.94E+3, 6.32E+3, NaN, NaN;...
- 94, 1.372E-3 , 4.27E+3, 4.32E+3, NaN, NaN;...
- 94, 1.559E-3 , 3.35E+3, 3.42E+3, NaN, NaN;...
- 94, 3.778E-3 , 4.99E+2, 1.18E+3, NaN, NaN;...
- 94, 3.973E-3 , 1.03E+3, 1.40E+3, NaN, NaN;...
- 94, 4.557E-3 , 1.04E+3, 1.21E+3, NaN, NaN;...
- 94, 5.541E-3 , 7.43E+2, 7.88E+2, NaN, NaN;...
- 94, 5.933E-3 , 6.67E+2, 6.95E+2, NaN, NaN;...
- 94, 1.806E-2 , 4.45E+1, 1.01E+2, NaN, NaN;...
- 94, 2.227E-2 , 5.80E+1, 8.17E+1, NaN, NaN;...
- 94, 2.310E-2 , 7.44E+1, 8.54E+1, NaN, NaN;...
- 94, 1.218E-1 , 1.32 , 4.59 , NaN, NaN;...
- 95, 1.14E-03, 5.90E+03, 6.27E+03, NaN, NaN;... % 5 N3
- 95, 1.41E-03, 4.15E+03, 4.20E+03, NaN, NaN;... %95 N2
- 95, 1.62E-03, 3.20E+03, 3.26E+03, NaN, NaN;... %95 N1
- 95, 3.89E-03, 4.81E+02, 1.11E+03, NaN, NaN;... %95 M5
- 95, 4.09E-03, 9.85E+02, 1.39E+03, NaN, NaN;... %95 M4
- 95, 4.67E-03, 1.01E+03, 1.17E+03, NaN, NaN;... %95 M3
- 95, 5.71E-03, 7.07E+02, 7.49E+02, NaN, NaN;... %95 M2
- 95, 6.12E-03, 6.32E+02, 6.58E+02, NaN, NaN;... %95 M1
- 95, 1.85E-02, 4.30E+01, 9.70E+01, NaN, NaN;... %95 L3
- 95, 2.29E-02, 5.50E+01, 7.75E+01, NaN, NaN;... %95 L2
- 95, 2.38E-02, 7.07E+01, 8.12E+01, NaN, NaN;... %95 L1
- 95, 1.25E-01, 1.28E+00, 4.38E+00, NaN, NaN;... %95 K
- 96, 1.15E-03, 5.88E+03, 6.24E+03, NaN, NaN;... %96 N3
- 96, 1.44E-03, 4.10E+03, 4.19E+03, NaN, NaN;... %96 N2
- 96, 1.64E-03, 3.18E+03, 3.24E+03, NaN, NaN;... %96 N1
- 96, 3.97E-03, 4.71E+02, 1.05E+03, NaN, NaN;... %96 M5
- 96, 4.23E-03, 9.32E+02, 1.30E+03, NaN, NaN;... %96 M4
- 96, 4.80E-03, 9.65E+02, 1.12E+03, NaN, NaN;... %96 M3
- 96, 5.90E-03, 6.69E+02, 7.09E+02, NaN, NaN;... %96 M2
- 96, 6.29E-03, 6.05E+02, 6.30E+02, NaN, NaN;... %96 M1
- 96, 1.89E-02, 4.16E+01, 9.35E+01, NaN, NaN;... %96 L3
- 96, 2.38E-02, 5.12E+01, 7.22E+01, NaN, NaN;... %96 L2
- 96, 2.45E-02, 6.73E+01, 7.72E+01, NaN, NaN;... %96 L1
- 96, 1.28E-01, 1.24E+00, 4.18E+00, NaN, NaN;... %96 K
- 97, 1.24E-03, 5.41E+03, 5.75E+03, NaN, NaN;... %97 N3
- 97, 1.55E-03, 3.68E+03, 3.73E+03, NaN, NaN;... %97 N2
- 97, 1.76E-03, 2.90E+03, 2.96E+03, NaN, NaN;... %97 N1
- 97, 4.13E-03, 4.50E+02, 9.93E+02, NaN, NaN;... %97 M5
- 97, 4.37E-03, 8.97E+02, 1.24E+03, NaN, NaN;... %97 M4
- 97, 4.98E-03, 9.16E+02, 1.07E+03, NaN, NaN;... %97 M3
- 97, 6.15E-03, 6.28E+02, 6.65E+02, NaN, NaN;... %97 M2
- 97, 6.56E-03, 5.68E+02, 5.91E+02, NaN, NaN;... %97 M1
- 97, 1.95E-02, 4.05E+01, 9.09E+01, NaN, NaN;... %97 L3
- 97, 2.44E-02, 5.00E+01, 7.07E+01, NaN, NaN;... %97 L2
- 97, 2.53E-02, 6.43E+01, 7.38E+01, NaN, NaN;... %97 L1
- 97, 1.32E-01, 1.22E+00, 4.06E+00, NaN, NaN;... %97 K
- 98, 1.28E-03, 5.20E+03, 5.54E+03, NaN, NaN;... %98 N3
- 98, 1.62E-03, 3.50E+03, 3.54E+03, NaN, NaN;... %98 N2
- 98, 1.80E-03, 2.84E+03, 2.89E+03, NaN, NaN;... %98 N1
- 98, 4.25E-03, 4.32E+02, 9.55E+02, NaN, NaN;... %98 M5
- 98, 4.50E-03, 8.55E+02, 1.18E+03, NaN, NaN;... %98 M4
- 98, 5.11E-03, 8.79E+02, 1.02E+03, NaN, NaN;... %98 M3
- 98, 6.36E-03, 5.90E+02, 6.25E+02, NaN, NaN;... %98 M2
- 98, 6.75E-03, 5.39E+02, 5.61E+02, NaN, NaN;... %98 M1
- 98, 1.99E-02, 3.91E+01, 8.61E+01, NaN, NaN;... %98 L3
- 98, 2.53E-02, 4.66E+01, 6.60E+01, NaN, NaN;... %98 L2
- 98, 2.61E-02, 6.06E+01, 6.95E+01, NaN, NaN;... %98 L1
- 98, 1.36E-01, 1.16E+00, 3.81E+00, NaN, NaN;... %98 K
- 99, 1.03E-03, 7.41E+03, 7.64E+03, NaN, NaN;... %99 N4
- 99, 1.32E-03, 5.08E+03, 5.41E+03, NaN, NaN;... %99 N3
- 99, 1.68E-03, 3.36E+03, 3.40E+03, NaN, NaN;... %99 N2
- 99, 1.87E-03, 2.73E+03, 2.77E+03, NaN, NaN;... %99 N1
- 99, 4.37E-03, 4.21E+02, 9.16E+02, NaN, NaN;... %99 M5
- 99, 4.63E-03, 8.24E+02, 1.14E+03, NaN, NaN;... %99 M4
- 99, 5.25E-03, 8.49E+02, 9.90E+02, NaN, NaN;... %99 M3
- 99, 6.57E-03, 5.63E+02, 5.96E+02, NaN, NaN;... %99 M2
- 99, 6.98E-03, 5.15E+02, 5.36E+02, NaN, NaN;... %99 M1
- 99, 2.04E-02, 3.81E+01, 8.46E+01, NaN, NaN;... %99 L3
- 99, 2.60E-02, 4.46E+01, 6.33E+01, NaN, NaN;... %99 L2
- 99, 2.69E-02, 5.81E+01, 6.67E+01, NaN, NaN;... %99 L1
- 99, 1.40E-01, 1.13E+00, 3.68E+00, NaN, NaN;... %99 K
- 100, 1.00E-03, 7.11E+03, 7.42E+03, NaN, NaN;... %100 N5
- 100, 1.07E-03, 7.11E+03, 7.32E+03, NaN, NaN;... %100 N4
- 100, 1.37E-03, 4.87E+03, 5.18E+03, NaN, NaN;... %100 N3
- 100, 1.75E-03, 3.17E+03, 3.21E+03, NaN, NaN;... %100 N2
- 100, 1.94E-03, 2.58E+03, 2.63E+03, NaN, NaN;... %100 N1
- 100, 4.50E-03, 4.03E+02, 8.66E+02, NaN, NaN;... %100 M5
- 100, 4.77E-03, 7.83E+02, 1.07E+03, NaN, NaN;... %100 M4
- 100, 5.40E-03, 8.09E+02, 9.43E+02, NaN, NaN;... %100 M3
- 100, 6.79E-03, 5.28E+02, 5.59E+02, NaN, NaN;... %100 M2
- 100, 7.21E-03, 4.83E+02, 5.03E+02, NaN, NaN;... %100 M1
- 100, 2.09E-02, 3.66E+01, 8.10E+01, NaN, NaN;... %100 L3
- 100, 2.68E-02, 4.21E+01, 5.98E+01, NaN, NaN;... %100 L2
- 100, 2.77E-02, 5.50E+01, 6.30E+01, NaN, NaN;... %100 L1
- 100, 1.43E-01, 1.09E+00, 3.50E+00, NaN, NaN;... %100 K
-];
-
-end
-
-%% Initialize variables
-Element = Element(:);
-nData = max(size(mac, 1),size(meac, 1));
-nElement = length(Element);
-nEnergy = length(Energy);
-AttCoef = zeros(nEnergy, nElement);
-AbsEdge = [];
-if (nEnergy==0 || any(Energy<0.0009) || any(Energy>21))
- warning('PhotonAttenuation:wrongEnergy',...
- 'PhotonAttenuation function: energy is outside of the recomended range from 0.001 MeV to 20 MeV');
-end
-Energy = log(Energy(:));
-
-%% Main Loop
-for i = 1:nElement
- element = round(Element(i));
-
- if (ischar(element) || any(element<1) || any(element>nData))
- error(['Error in PhotonAttenuationQ function: Z number outside [1, 100] range: ', num2str(element)]);
- end
-
- x = energy';
- if(Options==1), y = mac (element, :)';
- else y = meac(element, :)'; end
- if (element>10) % if absorbtion edges are present for this element
- ed = edges(edges(:, 1)==element, :); % check if 'element' has edges
- nEdge = size(ed, 1);
- e = ed(:, 2)'; % energy of absorbtion edges
- d = 4*eps(e); % create offset to create 2 different energies for upper and lower end of the edge
- xx = [e-d; e+d]; % energies
- if(Options==1), yy = ed(:, 3:4)'; % mac values
- else yy = ed(:, 5:6)'; end % meac values
- w = [zeros(size(x)); ones(2*nEdge, 1)]; % this is array that will help keep track of edges
- x = log([x; xx(:)]);
- y = log([y; yy(:)]);
- [x, ix] = sort(x); % merge absorbtion edge data with other data
- y = y(ix, :);
- w = w(ix, :); % array with 0 for 'grid' points and 1's for absorbtion edge points
- w = (convn(w, [1; 1; 1], 'same')>0); % neighbors of edges will be marked with 1's too
- b = interp1(x, [y, w], Energy, 'linear', 'extrap'); % merge inputs for speed
- a = interp1(x, y, Energy, 'pchip');
- v = b(:, 2);
- b = b(:, 1);
- a = a.*(1-v) + b.*v; % smoothly merge curves using linear near edges and cubic otherwise
- %figure; plot(x, y(:, 1), 'mx'); hold on; plot(Energy, a(:, 1));
- AbsEdge = [AbsEdge; [(1:nEdge)', flipud(ed)]]; %#ok
- else % if there are no absorbtion edges than life is easy
- a = interp1(log(x), log(y), Energy, 'pchip');
- end
- AttCoef(:,i) = exp(a);
-end
\ No newline at end of file
From 23f10144849c0271c8620afb382bc801e652dc26 Mon Sep 17 00:00:00 2001
From: Joshua Gray <61458311+jgray-19@users.noreply.github.com>
Date: Mon, 22 Jan 2024 14:55:18 +0000
Subject: [PATCH 4/8] Update main.yml to open project
---
.github/workflows/main.yml | 4 ++++
1 file changed, 4 insertions(+)
diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
index e4a7e2c..653a33c 100644
--- a/.github/workflows/main.yml
+++ b/.github/workflows/main.yml
@@ -21,6 +21,10 @@ jobs:
uses: actions/checkout@v3
- name: Set up MATLAB
uses: matlab-actions/setup-matlab@v1
+ - name: Open Project
+ uses: matlab-actions/run-command@v1
+ with:
+ command: openProject("DECTSim.prj")
- name: Run tests and generate artifacts
uses: matlab-actions/run-tests@v1
with:
From c1ed97840808ee3cf942540709cff0f75416875c Mon Sep 17 00:00:00 2001
From: Joshua Gray <61458311+jgray-19@users.noreply.github.com>
Date: Mon, 22 Jan 2024 15:01:10 +0000
Subject: [PATCH 5/8] Update main.yml to add PhotonAttenutation to the prokect
---
.github/workflows/main.yml | 6 +++++-
1 file changed, 5 insertions(+), 1 deletion(-)
diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
index 653a33c..223bca5 100644
--- a/.github/workflows/main.yml
+++ b/.github/workflows/main.yml
@@ -24,7 +24,11 @@ jobs:
- name: Open Project
uses: matlab-actions/run-command@v1
with:
- command: openProject("DECTSim.prj")
+ command: proj = openProject("DECTSim.prj")
+ - name: Add Photon Attenuation to project
+ uses: matlab-actions/run-command@v1
+ with:
+ command: addFile(proj,'src/PhotonAttenuationQ.m')
- name: Run tests and generate artifacts
uses: matlab-actions/run-tests@v1
with:
From bc154f5e927fa82ca949cc363ea288a702d701de Mon Sep 17 00:00:00 2001
From: Joshua Gray <61458311+jgray-19@users.noreply.github.com>
Date: Mon, 22 Jan 2024 15:06:07 +0000
Subject: [PATCH 6/8] Simplify adding file to project
---
.github/workflows/main.yml | 8 ++------
1 file changed, 2 insertions(+), 6 deletions(-)
diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
index 223bca5..6fcb821 100644
--- a/.github/workflows/main.yml
+++ b/.github/workflows/main.yml
@@ -21,14 +21,10 @@ jobs:
uses: actions/checkout@v3
- name: Set up MATLAB
uses: matlab-actions/setup-matlab@v1
- - name: Open Project
+ - name: Open Project and Add Photon Attenuation to project
uses: matlab-actions/run-command@v1
with:
- command: proj = openProject("DECTSim.prj")
- - name: Add Photon Attenuation to project
- uses: matlab-actions/run-command@v1
- with:
- command: addFile(proj,'src/PhotonAttenuationQ.m')
+ command: proj = openProject("DECTSim.prj"), addFile(proj,'src/PhotonAttenuationQ.m')
- name: Run tests and generate artifacts
uses: matlab-actions/run-tests@v1
with:
From d1542de877d2581ebd45be03973a6d0c7de9d83b Mon Sep 17 00:00:00 2001
From: Joshua Gray <61458311+jgray-19@users.noreply.github.com>
Date: Mon, 22 Jan 2024 15:44:51 +0000
Subject: [PATCH 7/8] Checkout repository before Photon attenuation package
---
.github/workflows/main.yml | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
index 6fcb821..2e1a35c 100644
--- a/.github/workflows/main.yml
+++ b/.github/workflows/main.yml
@@ -13,12 +13,12 @@ jobs:
name: Run MATLAB Tests and Generate Artifacts
runs-on: ubuntu-latest
steps:
+ - name: Check out repository
+ uses: actions/checkout@v3
- name: Get Photon Attenuation Package
run: wget https://uk.mathworks.com/matlabcentral/mlc-downloads/downloads/submissions/12092/versions/7/download/zip/PhotonAttenuation.zip
- name: Retrieve necessary file
run: unzip PhotonAttenuation.zip PhotonAttenuationQ.m -d src/
- - name: Check out repository
- uses: actions/checkout@v3
- name: Set up MATLAB
uses: matlab-actions/setup-matlab@v1
- name: Open Project and Add Photon Attenuation to project
From c90b73cfe78d3851cc0d14d80b1f7852da4a036b Mon Sep 17 00:00:00 2001
From: Joshua Gray <61458311+jgray-19@users.noreply.github.com>
Date: Mon, 22 Jan 2024 15:49:42 +0000
Subject: [PATCH 8/8] Attempt to simplify workflow file
---
.github/workflows/main.yml | 4 ----
1 file changed, 4 deletions(-)
diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
index 2e1a35c..7b9b62d 100644
--- a/.github/workflows/main.yml
+++ b/.github/workflows/main.yml
@@ -21,10 +21,6 @@ jobs:
run: unzip PhotonAttenuation.zip PhotonAttenuationQ.m -d src/
- name: Set up MATLAB
uses: matlab-actions/setup-matlab@v1
- - name: Open Project and Add Photon Attenuation to project
- uses: matlab-actions/run-command@v1
- with:
- command: proj = openProject("DECTSim.prj"), addFile(proj,'src/PhotonAttenuationQ.m')
- name: Run tests and generate artifacts
uses: matlab-actions/run-tests@v1
with: