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lint_log.txt
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[2021-02-04 17:51:28,683] git.cmd [DEBUG ] Popen(['git', 'cat-file', '--batch-check'], cwd=/Users/xinsongdu/mnt/projects/nf-core-rump, universal_newlines=False, shell=None, istream=<valid stream>)
[2021-02-04 17:51:28,695] nf_core.lint [INFO ] Testing pipeline: [magenta].
[2021-02-04 17:51:28,701] nf_core.lint [DEBUG ] Running lint test: check_files_exist
[2021-02-04 17:51:28,702] nf_core.lint [DEBUG ] Running lint test: check_licence
[2021-02-04 17:51:28,702] nf_core.lint [DEBUG ] Running lint test: check_docker
[2021-02-04 17:51:28,702] nf_core.lint [DEBUG ] Running lint test: check_nextflow_config
[2021-02-04 17:51:28,702] nf_core.utils [DEBUG ] Found a config cache, loading: /Users/xinsongdu/.nextflow/nf-core/wf-config-cache-9806ba23e658943b431e46696.json
[2021-02-04 17:51:28,703] nf_core.lint [DEBUG ] Running lint test: check_actions_branch_protection
[2021-02-04 17:51:28,707] nf_core.lint [DEBUG ] Running lint test: check_actions_ci
[2021-02-04 17:51:28,713] nf_core.lint [DEBUG ] Running lint test: check_actions_lint
[2021-02-04 17:51:28,721] nf_core.lint [CRITICAL] Found test failures in `check_actions_lint`, halting lint run.
[2021-02-04 17:51:28,725] nf_core.lint [DEBUG ] Printing final results
[2021-02-04 17:51:54,483] git.cmd [DEBUG ] Popen(['git', 'cat-file', '--batch-check'], cwd=/Users/xinsongdu/mnt/projects/nf-core-rump, universal_newlines=False, shell=None, istream=<valid stream>)
[2021-02-04 17:51:54,495] nf_core.lint [INFO ] Testing pipeline: [magenta].
[2021-02-04 17:51:54,502] nf_core.lint [DEBUG ] Running lint test: check_files_exist
[2021-02-04 17:51:54,502] nf_core.lint [DEBUG ] Running lint test: check_licence
[2021-02-04 17:51:54,502] nf_core.lint [DEBUG ] Running lint test: check_docker
[2021-02-04 17:51:54,502] nf_core.lint [DEBUG ] Running lint test: check_nextflow_config
[2021-02-04 17:51:54,503] nf_core.utils [DEBUG ] Found a config cache, loading: /Users/xinsongdu/.nextflow/nf-core/wf-config-cache-9806ba23e658943b431e46696.json
[2021-02-04 17:51:54,503] nf_core.lint [DEBUG ] Running lint test: check_actions_branch_protection
[2021-02-04 17:51:54,507] nf_core.lint [DEBUG ] Running lint test: check_actions_ci
[2021-02-04 17:51:54,513] nf_core.lint [DEBUG ] Running lint test: check_actions_lint
[2021-02-04 17:51:54,521] nf_core.lint [DEBUG ] Running lint test: check_actions_awstest
[2021-02-04 17:51:54,526] nf_core.lint [DEBUG ] Running lint test: check_actions_awsfulltest
[2021-02-04 17:51:54,531] nf_core.lint [DEBUG ] Running lint test: check_readme
[2021-02-04 17:51:54,532] nf_core.lint [DEBUG ] Running lint test: check_conda_env_yaml
[2021-02-04 17:51:54,532] nf_core.lint [DEBUG ] Running lint test: check_conda_dockerfile
[2021-02-04 17:51:54,532] nf_core.lint [DEBUG ] Running lint test: check_pipeline_todos
[2021-02-04 17:52:26,695] nf_core.lint [DEBUG ] Running lint test: check_pipeline_name
[2021-02-04 17:52:26,695] nf_core.lint [DEBUG ] Running lint test: check_cookiecutter_strings
[2021-02-04 17:52:34,632] nf_core.lint [DEBUG ] Running lint test: check_schema_lint
[2021-02-04 17:52:34,638] nf_core.utils [DEBUG ] Found a config cache, loading: /Users/xinsongdu/.nextflow/nf-core/wf-config-cache-9806ba23e658943b431e46696.json
[2021-02-04 17:52:34,639] nf_core.lint [DEBUG ] Running lint test: check_schema_params
[2021-02-04 17:52:34,642] nf_core.lint [DEBUG ] Printing final results