pyproject.toml

[build-system]
requires = ["setuptools"]
build-backend = "setuptools.build_meta"

[project]
name = "CrossMap"
version = "0.7.3"
authors = [
  {name="Liguo Wang", email="wangliguo78@gmail.com"},
]
maintainers = [
  {name = "Liguo Wang", email = "wangliguo78@gmail.com"}
]
description = "CrossMap -- Lift over genomics coordinates between assemblies."
readme = "README.rst"
license = {file = "LICENSE.txt"}
requires-python = ">=3.8"
#[tool.setuptools.packages.find]
#where = ["src"]
#include = ["dmc"]
dependencies = [
  'pysam',
  'bx-python',
  'pyBigWig',
]
classifiers=[
	"Programming Language :: Python :: 3",
	'Development Status :: 4 - Beta',
	"License :: OSI Approved :: MIT License",
	'Environment :: Console',
	'Intended Audience :: Science/Research',
	'Operating System :: MacOS :: MacOS X',
	'Operating System :: POSIX',
	'Topic :: Scientific/Engineering :: Bio-Informatics',
]

keywords = ["liftover", "genome", "coordinates"]

[project.scripts]
CrossMap = "cmmodule:crossmap"

[project.urls]
Documentation = "https://crossmap.readthedocs.io/en/latest/"
Repository = "https://github.com/liguowang/CrossMap.git"
Issues = "https://github.com/liguowang/CrossMap/issues"