v7.7.1

What's Changed

• preferred usage report by @turbomam in #134
• tube/well/plate still unexpected pass by @turbomam in #135
• nmdc-schema v7.7.1 by @turbomam in #137
• linkml v1.5.6 by @turbomam in #136

Full Changelog: v7.6.5...v7.7.1

v7.6.5

What's Changed

• add emsl sample data by @brynnz22 in #130
• Add validation to water_content slot by @pkalita-lbl in #124
• regen for v7.6.5 by @turbomam in #132

Full Changelog: v7.6.0...v7.6.5

v7.6.0

What's Changed

• Misc minor fixes by @pkalita-lbl in #101
• inherit tube/plate/well rules from nmdc-schema and provide valid and invalid examples by @turbomam in #103
• move these to dev-dependencies: exhaustion-check and gen-pop-linkml2sheets by @turbomam in #105
• Make samp_named required and unique instead of source_mat_id by @pkalita-lbl in #108
• update nmdc-schema usage to e8f9bbdf7273dcfd440067067c61cecc5d8a86d9 by @turbomam in #110
• valid and invalid plant assoc data by @turbomam in #100
• jgi-mt data examples by @brynnz22 in #113
• removed extra . from data file name; sorted keys by @turbomam in #117
• Direct submission of soil samples by @turbomam in #119
• update nmdc-schema imports by @turbomam in #120
• oxy_stat_samp, not rel_to_oxygen for all classes by @turbomam in #123
• add jgi-mg-interaface sample data files by @brynnz22 in #125
• valids pass, invalids don't by @turbomam in #128
• pinned to nmdc-schema v.7.6.0 by @turbomam in #126

New Contributors

• @brynnz22 made their first contribution in #113

Full Changelog: v1.0.2...v7.6.0

v1.0.2

What's Changed

• schemasheets 1.2 by @turbomam in #84
• Dependencies and TSV cleanup by @turbomam in #86
• dh <-> linkml json conversion by @turbomam in #88
• Use template query param to select initial template if given by @pkalita-lbl in #90
• Restore lost slot attribues by @pkalita-lbl in #93
• Shorten underscores in envo enum PVs by @pkalita-lbl in #94

Full Changelog: v1.0.1...v1.0.2

v1.0.1

What's Changed

• project.Makefile with fewer yq commands by @turbomam in #45
• Sample soil data with and without elev values by @turbomam in #46
• jgi and emsl sample data by @turbomam in #52
• more shuttling less defining by @turbomam in #54
• Add DataHarmonizer-based interactive testing interface by @pkalita-lbl in #55
• Update README.md by @turbomam in #56
• linkml2sheets output -> schema_sheets/populated_tsv/slot_usage_minimal.tsv by @turbomam in #58
• Misc minor updates by @pkalita-lbl in #60
• regen by @turbomam in #61
• Commented out deploy in Makefile by @turbomam in #67
• add playground link to about.md by @turbomam in #68
• cp src/docs/*md docs/ before poetry run mkdocs build -d dist by @turbomam in #70
• updated slot class assignments, esp regarding mixins by @turbomam in #69
• Illustrations of LinkML and DH JSON differences by @turbomam in #73
• more direct path to playground by @turbomam in #74
• enum reuse by @turbomam in #76
• Soil mixs env* enums by @turbomam in #79
• Remove dna/rna organisms and collect_site slots by @turbomam in #80

Full Changelog: v1.0.0...v1.0.1

v1.0.0

Initial release of the NMDC submission schema from this repository (previously was built in https://github.com/microbiomedata/sheets_and_friends)

Migration Concerns

Renamed Classes

Previous Name	New Name
air	AirInterface
biofilm	BiofilmInterface
built_env	BuiltEnvInterface
emsl	EmslInterface
hcr-cores	HcrCoresInterface
hcr-fluids-swabs	HcrFluidsSwabsInterface
host-associated	HostAssociatedInterface
jgi_mg	JgiMgInterface
jgi_mt	JgiMtInterface
misc-envs	MiscEnvsInterface
plant-associated	PlantAssociatedInterface
sediment	SedimentInterface
soil	SoilInterface
wastewater_sludge	WastewaterSludgeInterface
water	WaterInterface
dh_mutliview_common_columns	DhMultiviewCommonColumnsMixin
samp_id_new_terms_mixin	SampIdNewTermsMixin
soil_mixs_inspired_mixin	SoilMixsInspiredMixin
dh_interface	DhInterface
emsl	EmslInterface
jgi_mg	JgiMgInterface
jgi_mt	JgiMtInterface

Renamed Slots

Previous Name	New Name
hcr-cores_data	hcr_cores_data
hcr-fluids-swabs_data	hcr_fluids_swabs_data
host-associated_data	host_associated_data
misc-envs_data	misc_envs_data
plant-associated_data	plant_associated_data

Removed classes

• bioscales

Removed slots

• bioscales_data

v1.0.0-rc.3

Test publishing workflow

v1.0.0-rc.2

Test publishing pipeline

v1.0.0-rc.1

Test release pipeline