From 1f8c7a02dd6527beaa290e8d86ebc4ece4225ea1 Mon Sep 17 00:00:00 2001 From: caufieldjh Date: Fri, 27 Sep 2024 16:55:29 -0400 Subject: [PATCH 1/2] Change curate-gpt to curategpt --- .cruft.json | 4 ++-- .github/workflows/qc.yml | 2 +- CITATION.cff | 4 ++-- CONTRIBUTING.md | 6 +++--- LICENSE | 2 +- README.md | 8 ++++---- docs/index.rst | 4 ++-- pyproject.toml | 4 ++-- src/curate_gpt/app/app.py | 2 +- src/curate_gpt/cli.py | 4 ++-- tests/__init__.py | 2 +- 11 files changed, 21 insertions(+), 21 deletions(-) diff --git a/.cruft.json b/.cruft.json index 88ee3fd..13d428e 100644 --- a/.cruft.json +++ b/.cruft.json @@ -4,9 +4,9 @@ "checkout": null, "context": { "cookiecutter": { - "project_name": "curate-gpt", + "project_name": "curategpt", "github_org_name": "monarch-initiative", - "__project_slug": "curate_gpt", + "__project_slug": "curategpt", "project_description": "GPT-powered knowledge acquisition UI", "min_python_version": "3.8", "file_name": "main", diff --git a/.github/workflows/qc.yml b/.github/workflows/qc.yml index 0e66790..25ded74 100644 --- a/.github/workflows/qc.yml +++ b/.github/workflows/qc.yml @@ -1,4 +1,4 @@ -name: curate-gpt QC +name: curategpt QC on: push: diff --git a/CITATION.cff b/CITATION.cff index 2bca6ed..9732ae6 100644 --- a/CITATION.cff +++ b/CITATION.cff @@ -7,7 +7,7 @@ authors: - family-names: "Mungall" given-names: "Chris" orcid: "https://orcid.org/0000-0002-6601-2165" -title: "Curate-GPT" +title: "CurateGPT" doi: 10.5281/zenodo.8388002 date-released: 2023-08-01 -url: "https://github.com/monarch-initiative/curate-gpt" +url: "https://github.com/monarch-initiative/curategpt" diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md index 64bc50e..637dca8 100644 --- a/CONTRIBUTING.md +++ b/CONTRIBUTING.md @@ -6,7 +6,7 @@ When contributing to this repository, please first discuss the changes you wish ### Reporting bugs or making feature requests -To report a bug or suggest a new feature, please go to the [monarch-initiative/curate-gpt issue tracker](https://github.com/monarch-initiative/curate-gpt/issues), as we are +To report a bug or suggest a new feature, please go to the [monarch-initiative/curategpt issue tracker](https://github.com/monarch-initiative/curategpt/issues), as we are consolidating issues there. Please supply enough details to the developers to enable them to verify and troubleshoot your issue: @@ -46,7 +46,7 @@ and make your changes on a [new branch][about-branches]. [about-branches]: https://docs.github.com/en/pull-requests/collaborating-with-pull-requests/proposing-changes-to-your-work-with-pull-requests/about-branches [about-issues]: https://docs.github.com/en/issues/tracking-your-work-with-issues/about-issues [about-pulls]: https://docs.github.com/en/pull-requests/collaborating-with-pull-requests/proposing-changes-to-your-work-with-pull-requests/about-pull-requests -[issues]: https://github.com/monarch-initiative/curate-gpt/issues/ -[pulls]: https://github.com/monarch-initiative/curate-gpt/pulls/ +[issues]: https://github.com/monarch-initiative/curategpt/issues/ +[pulls]: https://github.com/monarch-initiative/curategpt/pulls/ We recommend also reading [GitHub Pull Requests: 10 Tips to Know](https://blog.mergify.com/github-pull-requests-10-tips-to-know/) diff --git a/LICENSE b/LICENSE index 6c1b65f..d614330 100644 --- a/LICENSE +++ b/LICENSE @@ -12,7 +12,7 @@ modification, are permitted provided that the following conditions are met: this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. -* Neither the name of pytest-curate-gpt nor the names of its +* Neither the name of curategpt nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission. diff --git a/README.md b/README.md index d7aa4ea..5fe80f3 100644 --- a/README.md +++ b/README.md @@ -15,11 +15,11 @@ subset of the functionality of the local app) You will first need to [install Poetry](https://python-poetry.org/docs/#installation). -Then clone this repo +Then clone this repo. ``` -git clone https://github.com/monarch-initiative/curate-gpt.git -cd curate-gpt +git clone https://github.com/monarch-initiative/curategpt.git +cd curategpt ``` and install the dependencies: @@ -131,7 +131,7 @@ The following are also supported: Currently this tool works best with the OpenAI gpt-4 model (for instruction tasks) and OpenAI `ada-text-embedding-002` for embedding. -Curate-GPT is layered on top of [simonw/llm](https://github.com/simonw/llm) which has a plugin +CurateGPT is layered on top of [simonw/llm](https://github.com/simonw/llm) which has a plugin architecture for using alternative models. In theory you can use any of these plugins. Additionally, you can set up an openai-emulating proxy using [litellm](https://github.com/BerriAI/litellm/). diff --git a/docs/index.rst b/docs/index.rst index ae12b14..90f1645 100644 --- a/docs/index.rst +++ b/docs/index.rst @@ -1,9 +1,9 @@ -.. curate-gpt documentation master file, created by +.. curategpt documentation master file, created by sphinx-quickstart on Fri Aug 12 08:35:01 2022. You can adapt this file completely to your liking, but it should at least contain the root `toctree` directive. -Welcome to curate-gpt's documentation! +Welcome to curategpt's documentation! ========================================================= .. toctree:: diff --git a/pyproject.toml b/pyproject.toml index 53ffc54..b62ce8c 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,7 +1,7 @@ [tool.poetry] -name = "curate-gpt" +name = "curategpt" version = "0.2.0" -description = "curate-gpt" +description = "CurateGPT" authors = ["Author 1 "] license = "BSD-3" readme = "README.md" diff --git a/src/curate_gpt/app/app.py b/src/curate_gpt/app/app.py index 2cf9ccc..a609e4f 100644 --- a/src/curate_gpt/app/app.py +++ b/src/curate_gpt/app/app.py @@ -707,7 +707,7 @@ def _flat(obj: dict, limit=40) -> dict: st.subheader("Issues") st.write( "If you have any issues, please raise them on the" - "[GitHub issue tracker](https://github.com/monarch-initiative/curate-gpt)." + "[GitHub issue tracker](https://github.com/monarch-initiative/curategpt)." ) st.subheader("Warning!") st.caption("CurateGPT is pre-alpha, documentation is incomplete!") diff --git a/src/curate_gpt/cli.py b/src/curate_gpt/cli.py index d98ab65..1b5af8e 100644 --- a/src/curate_gpt/cli.py +++ b/src/curate_gpt/cli.py @@ -1,4 +1,4 @@ -"""Command line interface for curate-gpt.""" +"""Command line interface for curategpt.""" import csv import gzip @@ -208,7 +208,7 @@ def show_chat_response(response: ChatResponse, show_references: bool = True): @click.version_option(__version__) def main(verbose: int, quiet: bool): """ - CLI for curate-gpt. + CLI for curategpt. :param verbose: Verbosity while running. :param quiet: Boolean to be quiet or verbose. diff --git a/tests/__init__.py b/tests/__init__.py index 5492dd8..2a9f701 100644 --- a/tests/__init__.py +++ b/tests/__init__.py @@ -1,4 +1,4 @@ -"""Tests for curate-gpt.""" +"""Tests for curategpt.""" import os from pathlib import Path From 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