mkdocs.yml

site_name: PhEval
theme:
  name: material
  palette:
    - scheme: default
      primary: indigo
      toggle:
        icon: material/weather-night
        name: Night Mode
    - scheme: slate
      primary: indigo
      toggle:
        icon: material/weather-sunny
        name: Day Mode

markdown_extensions:
  - pymdownx.emoji
  - pymdownx.tasklist
  - pymdownx.mark
  - pymdownx.tilde
  - pymdownx.highlight
  - mkdocs-click
  - pymdownx.superfences:
      custom_fences:
        - name: mermaid
          class: mermaid
          format: !!python/name:pymdownx.superfences.fence_div_format

extra_css:
  - https://unpkg.com/mermaid@8.5.1/dist/mermaid.css
  - mermaid.css
extra_javascript:
  - https://unpkg.com/mermaid@8.5.1/dist/mermaid.min.js

plugins:
  - search
  - autorefs
  - include_dir_to_nav
  - mkdocstrings:
      enable_inventory: true

watch:
  - src

nav:
  - "index.md"
  - Pipeline:
    - "exomiser_pipeline.md"
    - "pipeline.md"
  - About: "about.md"
  - Contact Us: "contact.md"
  - API Documentation: api/pheval/
  - Resources for contributors:
      - "developing_a_pheval_plugin.md"
      - "contributing.md"
      - "styleguide.md"
      - "CODE_OF_CONDUCT.md"
  - Plugins: "plugins.md"
  - Executing a Benchmark: "executing_a_benchmark.md"
  - "roadmap.md"


site_url: https://monarch-initiative.github.io/pheval/
repo_url: https://github.com/monarch-initiative/pheval
edit_uri: "edit/docs/docs/"