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This was asked at the HUPO2024. I think it should be quite easy to convert the files into mzml and calculate most of the values.
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Should be doable. there already is documentation how to convert with ProteoWizard: https://community.sciex.com/2021/08/05/using-proteowizard-for-converting-files-for-use-in-proteinpilot-software/
We could just use this container: https://github.com/ProteoWizard/container
and then would need to add the corresponding processes into the this nextflow script: https://github.com/mpc-bioinformatics/McQuaC/blob/main/src/io/raw_file_conversion.nf
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This was asked at the HUPO2024. I think it should be quite easy to convert the files into mzml and calculate most of the values.
The text was updated successfully, but these errors were encountered: