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Need process to rename FASTA sequence IDs with their taxIDs for Kaiju #67

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jfy133 opened this issue Jan 22, 2025 · 0 comments · May be fixed by #68
Open

Need process to rename FASTA sequence IDs with their taxIDs for Kaiju #67

jfy133 opened this issue Jan 22, 2025 · 0 comments · May be fixed by #68
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jfy133 commented Jan 22, 2025

Description of the bug

As required here: https://github.com/bioinformatics-centre/kaiju?tab=readme-ov-file#custom-database

It should be quite straight forward because we require that info

If no taxon ID in header - Kaiju classificaiton will fail becuase it's at teh classification step where taxonomy information is added

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@jfy133 jfy133 added the bug Something isn't working label Jan 22, 2025
@jfy133 jfy133 added this to the First release milestone Jan 22, 2025
@jfy133 jfy133 changed the title Need process to rename FASTA sequence IDs with their taxIDs Need process to rename FASTA sequence IDs with their taxIDs for Kaiju Jan 23, 2025
@jfy133 jfy133 linked a pull request Jan 23, 2025 that will close this issue
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