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adding zenodo_release to nf-core.yml does still produce a warning #3398

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marrip opened this issue Jan 15, 2025 · 0 comments
Open

adding zenodo_release to nf-core.yml does still produce a warning #3398

marrip opened this issue Jan 15, 2025 · 0 comments
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marrip commented Jan 15, 2025

Description of the bug

I tried to remove the triggers for different linting steps and wanted to get rid of readme:zenodo_release and did as it said here. I added the following to my nf-core.yml:

lint:
  ...
  readme:
    - nextflow_badge
    - zenodo_release

However, when I run nf-core pipeline lint -d ./my-pipeline I still get:

readme: README contains the placeholder zenodo.XXXXXXX. This should be replaced with the zenodo doi (after the first release).

I had to do readme: false to remove it from the warnings.

Command used and terminal output

$ nf-core pipeline lint -d ./my-pipeline

...
readme: README contains the placeholder zenodo.XXXXXXX. This should be replaced with the zenodo doi (after the first release).

System information

I am using nfcore/gitpod:3.1.1

@marrip marrip added the bug Something isn't working label Jan 15, 2025
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