From 14c3e03d2c7f035dfe305d0988a331b2382fb85c Mon Sep 17 00:00:00 2001 From: Mahesh Binzer-Panchal Date: Fri, 8 Nov 2024 13:40:32 +0000 Subject: [PATCH 1/2] Update Gitpod to use Miniforge instead of Miniconda --- nf_core/gitpod/gitpod.Dockerfile | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/nf_core/gitpod/gitpod.Dockerfile b/nf_core/gitpod/gitpod.Dockerfile index 2a9fbb0ed6..78a528c19d 100644 --- a/nf_core/gitpod/gitpod.Dockerfile +++ b/nf_core/gitpod/gitpod.Dockerfile @@ -23,9 +23,9 @@ RUN apt-get update --quiet && \ add-apt-repository -y ppa:apptainer/ppa && \ apt-get update --quiet && \ apt-get install --quiet --yes apptainer && \ - wget --quiet https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh && \ - bash Miniconda3-latest-Linux-x86_64.sh -b -p /opt/conda && \ - rm Miniconda3-latest-Linux-x86_64.sh && \ + wget --quiet https://github.com/conda-forge/miniforge/releases/latest/download/Miniforge3-Linux-x86_64.sh && \ + bash Miniforge3-Linux-x86_64.sh -b -p /opt/conda && \ + rm Miniforge3-Linux-x86_64.sh && \ apt-get clean && \ rm -rf /var/lib/apt/lists/* From f410310b4da481d8c64a64ad1ba2564ee388458c Mon Sep 17 00:00:00 2001 From: Mahesh Binzer-Panchal Date: Fri, 8 Nov 2024 13:44:25 +0000 Subject: [PATCH 2/2] Update Changelog --- CHANGELOG.md | 1 + 1 file changed, 1 insertion(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index 61d8dbf518..27534ed62c 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -35,6 +35,7 @@ - Update GitHub Actions ([#3237](https://github.com/nf-core/tools/pull/3237)) - add `--dir/-d` option to schema commands ([#3247](https://github.com/nf-core/tools/pull/3247)) - Update pre-commit hook astral-sh/ruff-pre-commit to v0.7.1 ([#3250](https://github.com/nf-core/tools/pull/3250)) +- Update Gitpod image to use Miniforge instead of Miniconda([#3274](https://github.com/nf-core/tools/pull/3274)) ## [v3.0.2 - Titanium Tapir Patch](https://github.com/nf-core/tools/releases/tag/3.0.2) - [2024-10-11]