Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add OAK diff on the release pipeline and documentation for editors #3333

Open
1 of 2 tasks
anitacaron opened this issue Aug 7, 2024 · 0 comments
Open
1 of 2 tasks
Assignees
Labels

Comments

@anitacaron
Copy link
Collaborator

anitacaron commented Aug 7, 2024

Add in the RELEASE DEPLOYMENT block in the uberon.Makefile, after the release-diff target the following code:

CURRENT_BASE_RELEASE=$(ONTBASE)/uberon-base.obo

.PHONY: $(TMPDIR)/current-base-release.obo
$(TMPDIR)/current-base-release.obo:
	wget $(CURRENT_BASE_RELEASE) -O $@

release_diff_oak:
	runoak -i simpleobo:$(TMPDIR)/current-base-release.obo diff -X simpleobo:$(RELEASEDIR)/uberon-base.obo -o $(REPORTDIR)/diff_release_oak.md --output-type md

Add release_diff_oak target to the uberon command, in the following code block:

uberon:
$(MAKE) prepare_release IMP=false PAT=false BRI=true CLEANFILES=tmp/merged-uberon-edit.obo
$(MAKE) release-diff
if [ $(DEPLOY_GH) = true ]; then $(MAKE) deploy_release GHVERSION="v$(TODAY)"; fi

Tasks

Preview Give feedback
@anitacaron anitacaron added the tech label Aug 7, 2024
@anitacaron anitacaron self-assigned this Aug 7, 2024
@anitacaron anitacaron closed this as not planned Won't fix, can't repro, duplicate, stale Aug 12, 2024
@anitacaron anitacaron reopened this Aug 12, 2024
@anitacaron anitacaron assigned aleixpuigb and unassigned anitacaron Sep 11, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
Projects
None yet
Development

No branches or pull requests

2 participants