v2.8.1

What's Changed

• TASK-4285 - GWAS cannot be executed by @pfurio in #2283
• TASK-4143 - Migration error: Issue in ClinicalMongoDBIterator by @pfurio in #2267
• TASK-4007 - Empty CellBase datarelease after project creation - variant-annotation-index fails by @j-coll in #2271
• TASK-4316 by @juanfeSanahuja in #2284
• TASK-4268 - Unable to execute jobs, "--token" param not found by @j-coll in #2282
• TASK-4273 - Add new public method to get a valid token for users by @pfurio in #2285
• TASK-4376 - CICD: errors in TemplateManagerTest by @j-coll in #2286

Full Changelog: v2.8.0...v2.8.1

v2.7.2

What's Changed

• TASK-4285 - GWAS cannot be executed by @pfurio in #2283
• TASK-4143 - Migration error: Issue in ClinicalMongoDBIterator by @pfurio in #2267
• TASK-4007 - Empty CellBase datarelease after project creation - variant-annotation-index fails by @j-coll in #2271
• TASK-4316 - Workflow of the branch release-2.7.x fails by @juanfeSanahuja in #2284

Full Changelog: v2.7.1...v2.7.2

v2.4.15

What's Changed

• TASK-4285 - GWAS cannot be executed by @pfurio in #2283

Full Changelog: v2.4.14...v2.4.15

v2.8.0

What's Changed

• TASK-4086 - CLI generator enterprise compatible by @juanfeSanahuja in #2260
• TASK-3980 - Categorize JUnit Test for OpenCGA by @juanfeSanahuja in #2265
• TASK-3885 - Script to create hotfix branch by @juanfeSanahuja in #2264
• TASK-2142 - Opencga - Automatic environment cloner deployment - Aka CLONATOR by @j-coll in #2249
• TASK-1562 - Pedigree graph with a three-generation family fails to render properly in Family browser detailed tab by @jtarraga in #2253
• TASK-2241 - Update Exomiser docker image to 13.1.0 by @jtarraga in #2254
• TASK-94 - Basis for OpenCGA Pathogenic Database by @jtarraga in #2268
• TASK-4149 - JUnit error in FillGapsTest.testFillGapsCorpasome by @j-coll in #2269
• TASK-3808 - CellBase token management to allow users to access to restricted/licensed data sources by @jtarraga in #2250
• TASK-4204 - CI/CD opencga errors when running Junit tests related to families. by @jtarraga in #2272
• TASK-4204 - CI/CD opencga errors when running Junit tests related to families. by @jtarraga in #2277
• TASK-4213 - Fix variant search to variant converter by @j-coll in #2278
• TASK-4212 - CLI - Problem with the token by @imedina in #2280
• TASK-4215 - Cannot initialise CatalogManager by @pfurio in #2279
• TASK-4204 - CI/CD opencga errors when running Junit tests related to families. by @j-coll in #2281

Full Changelog: v2.7.1...v2.8.0

v2.7.1

What's Changed

• TASK-3988 - Variant Annotation fills the ephemeral disk by @j-coll in #2256
• TASK-3897 - Error executing exomiser with custom workspace dir by @j-coll in #2257
• TASK-4074 - Field attributes in Clinical analysis is not set with update by @pfurio in #2259
• TASK-4117 - Variant query error by Compount Het by @j-coll in #2262

Full Changelog: v2.7.0...v2.7.1

v2.4.14

What's Changed

• TASK-3988 - Variant Annotation fills the ephemeral disk by @j-coll in #2256
• TASK-3897 - Error executing exomiser with custom workspace dir by @j-coll in #2257
• TASK-4074 - Field attributes in Clinical analysis is not set with update by @pfurio in #2259
• TASK-4117 - Variant query error by Compount Het by @j-coll in #2262

Full Changelog: v2.4.13.1...v2.4.14

v2.7.0

What's Changed

• TASK-2551 - Remove /user/create webservice by @pfurio in #2232
• TASK-612 - OpenCGA files/link raises a NullPointExeption if it has no read access to the file by @pfurio in #2241
• TASK-2549 - Role and modeOfInheritance changes in Panel data model by @pfurio in #2238
• TASK-2270 - Review and update JUnit Tests by @j-coll in #2251

Full Changelog: v2.6.1.1...v2.7.0

v2.6.1.1

What's Changed

• TASK-3908 - Unable to search for shared projects by @j-coll in #2248

Full Changelog: v2.6.1...v2.6.1.1

v2.4.13.1

What's Changed

• TASK-3908 - Unable to search for shared projects by @j-coll in #2248

Full Changelog: v2.4.13...v2.4.13.1

v2.6.1

What's Changed

• TASK-2259 - Disk quota exceeded by @jtarraga in #2220
• TASK-2539 - Sample and Individual not properly associated by @pfurio in #2223
• TASK-3813 - Fix gene coverage stats analysis when using CellBase data release by @jtarraga in #2234
• TASK-1973 - Project limit not working by @pfurio in #2194
• TASK-1574 - Unexpected "Killed" job at Kubernetes by @j-coll in #2243
• TASK-2530 - Error working with files with URL codes (e.g. %A3) in their name by @j-coll in #2244
• TASK-1304 - Sample.internal sampleGenotypeIndex and annotationIndex fields not updated in catalog after annotation and sample genotype index run by @j-coll in #2233
• TASK-3836 - Fix CellBase data release usage by @jtarraga in #2242
• TASK-3874 - Releases are not naming the opencga-ext-tools properly by @juanfeSanahuja in #2245
• TASK-3864 - Exomiser not finding samples when Individual and sample IDs are not the same by @jtarraga in #2246
• TASK-2531 - Virtual File by @j-coll in #2229
• TASK-1682 - Role in cancer filter not filtering properly by @j-coll in #2173
• TASK-2012 - python rest client: inconsistent parameter strings by @dapregi in #2153
• TASK-3893 - Clinical variant query failed in test environment with current 2.4.13 snapshot by @pfurio in #2247
• TASK-3837 - Remove opencga-storage-mongodb dependencies by @j-coll in #2240

Full Changelog: v2.6.0.1...v2.6.1