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@fishsciences Cramer Fish Sciences

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    37 repositories

    • artemis

      Public
      Assessing Response To E-DNA Methods In Sampling
      R
      •0•6•5•0•Updated Jan 14, 2025Jan 14, 2025

    • steelhead_ckmr_model

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Dec 11, 2024Dec 11, 2024

    • telemetry

      Public
      telemetry functions!
      R
      •0•1•0•0•Updated May 24, 2024May 24, 2024

    • dsm2-map

      Public
      Simple interactive map of channels and nodes in DSM2.
      R
      •
      MIT License
      •1•2•0•1•Updated Apr 25, 2024Apr 25, 2024

    • PyVCF

      Public
      A Variant Call Format reader for Python.
      Python
      •
      Other
      •223•0•0•0•Updated Apr 17, 2024Apr 17, 2024

    • metabarcode_utils

      Public
      R
      •0•0•0•0•Updated Feb 22, 2024Feb 22, 2024

    • 2022-white_sturgeon_synthesis

      Public
      R
      •1•0•0•0•Updated Jan 30, 2024Jan 30, 2024

    • wr_etf_data

      Public
      Data used for ETF survival analysis
      0•0•0•0•Updated Aug 23, 2023Aug 23, 2023

    • 2022-shasta_winter_run_survival-Public

      Public
      R
      •0•0•0•0•Updated Jun 13, 2023Jun 13, 2023

    • CDECRetrieve

      Public
      An R package to retrieve CDEC data
      R
      •
      Other
      •5•0•0•0•Updated Sep 23, 2022Sep 23, 2022

    • 2021-artemis_training

      Public
      R
      •0•0•0•0•Updated Jul 13, 2022Jul 13, 2022

    • elaphos

      Public
      Convenience functions for wrangling eDNA and qPCR data
      R
      •0•0•0•0•Updated Jul 8, 2022Jul 8, 2022

    • fishpals

      Public
      A package to generate fish color palettes
      R
      •
      Other
      •1•11•5•0•Updated Jul 6, 2022Jul 6, 2022

    • artemis_methods

      Public
      methods manuscript for artemis
      TeX
      •0•0•0•0•Updated May 16, 2022May 16, 2022

    • acoustic-telemetry-synthesis

      Public
      acoustic telemetry synthesis for describing juvenile Chinook diversity
      HTML
      •2•0•0•0•Updated Apr 22, 2022Apr 22, 2022

    • fishsciences.github.io

      Public
      Practical Pisces blog site
      HTML
      •0•0•2•0•Updated Jul 29, 2021Jul 29, 2021

    • DSM2Analysis

      Public
      R
      •1•0•0•0•Updated May 12, 2021May 12, 2021

    • cfs.misc

      Public
      Miscellaneous convenience functions
      R
      •
      MIT License
      •1•3•3•1•Updated Apr 15, 2021Apr 15, 2021

    • ybt

      Public
      Yolo Bypass Telemetry project R package
      R
      •0•0•3•0•Updated Mar 6, 2021Mar 6, 2021

    • 2021-DWR-Training

      Public
      R
      •0•0•0•0•Updated Jan 27, 2021Jan 27, 2021

    • YBT_Reports

      Public
      Repository that houses the reproducible report template and data cleaning scripts
      R
      •0•0•0•0•Updated Jan 27, 2021Jan 27, 2021

    • YoloBypassSBM

      Public
      R
      •2•0•0•0•Updated Dec 17, 2020Dec 17, 2020

    • 2020-R-Course

      Public
      R
      •1•2•0•0•Updated Sep 16, 2020Sep 16, 2020

    • CV_data_access_workshop

      Public
      Code for R exercises
      R
      •1•0•0•0•Updated Jun 19, 2020Jun 19, 2020

    • DSM2VizTool

      Public
      R
      •
      Other
      •1•0•0•0•Updated Jun 18, 2020Jun 18, 2020

    • DSM2-Viz-Tool

      Public
      A tool for visualizing DSM2 HYDRO output
      R
      •
      MIT License
      •1•4•0•0•Updated Jun 16, 2020Jun 16, 2020

    • real-time

      Public
      Real-time fish detection data for CalFishTrack
      R
      •1•0•0•0•Updated Jun 8, 2020Jun 8, 2020

    • chinook-length-weight

      Public
      Collection of equations for length-weight relationships in Chinook Salmon
      R
      •
      MIT License
      •1•0•0•0•Updated Apr 24, 2020Apr 24, 2020

    • DeltaPassageModel

      Public
      Delta Passage Model
      R
      •0•0•1•0•Updated Feb 22, 2020Feb 22, 2020

    • safe-example

      Public
      California Select Area Fishery Enhancement (CalSAFE)
      R
      •1•0•0•0•Updated Jan 17, 2020Jan 17, 2020