-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy path_r_val_hub_intro.qmd
172 lines (131 loc) · 5 KB
/
_r_val_hub_intro.qmd
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
# 👋 Who We Are {transition="none-in slide-out"}
```{=html}
<style>
.panel {
font-size: 0.6em;
background: rgba(0.75, 0.75, 0.75, 0.1);
padding: 1%;
margin: 1%;
border-radius: 0.5em;
border-bottom: solid 0.2em rgba(1, 1, 1, 0.1);
}
.center {
--r-heading-margin: auto;
width: fit-content;
}
.person {
font-weight: bold;
font-size: 0.8em;
margin: 1em 0 0.5em 0;
}
.person p {
display: inline;
}
.person:before {
display: inline;
content: "👤 ";
}
.badge-pill {
font-weight: bold;
background: var(--r-link-color);
color: white;
border-radius: 1em;
padding: 0 0.5em;
}
</style>
```
::: { style="font-size: 0.7em;" }
> The ***R Validation Hub*** is a collaboration to support the adoption of R
> within a biopharmaceutical regulatory setting ([pharmaR.org](https://www.pharmaR.org))
:::
* Grew out of **R/Pharma 2018**
* Led by participants from **~10 organizations**
* With frequent involvement from health authorities (primarily the FDA)
* And subscribers from **~60 organizations** spanning multiple industries
## 🤝 Affiliates: ![](assets/camis.png){height="1.2em" width="1.2em" style="margin: 0 0.2em; border-radius: 50%; object-fit: cover; background: #CBC; vertical-align: middle;"} PSI/AIMS (CAMIS) {transition="slide-in slide-out"}
::::: {.columns}
:::: {.column width="65%"}
::: { style="font-size: 0.6em;" }
> **C**omparing **A**nalysis **M**ethod **I**mplementations in **S**oftware
> A cross-industry group formed of members from PHUSE, PSI, and ASA.
:::
::: { style="font-size: 0.7em;" }
- Released a [white paper](https://phuse.s3.eu-central-1.amazonaws.com/Deliverables/Data+Visualisation+%26+Open+Source+Technology/WP077.pdf) providing guidance on appropriate use of stats methods, for example:
* Don't default to the defaults
* Be specific when drafting analysis plans, including precise methods & options
- A resource for knowing the details of methods across languages
:::
::::
:::: {.column width="35%"}
![](assets/CAMIS-white-paper.png)
::::
:::::
## 🤝 Affiliates: ![](assets/camis.png){height="1.2em" width="1.2em" style="margin: 0 0.2em; border-radius: 50%; object-fit: cover; background: #CBC; vertical-align: middle;"} PSI/AIMS (CAMIS) {transition="slide-in slide-out"}
::: {style="font-size: 0.85em"}
- Currently building a repository of methods comparisons at
[psiaims.github.io/CAMIS](https://psiaims.github.io/CAMIS/).
- Check out their
[contributors page](https://psiaims.github.io/CAMIS/contribution.html) to
learn how you can get involved!
| Methods | | R | SAS | Comparison |
| ------------------ | ------------------ | --- | --- | -----------|
| Summary Statistics | Rounding | [`R`](https://psiaims.github.io/CAMIS/R/rounding.html) | [`SAS`](https://psiaims.github.io/CAMIS/SAS/rounding.html) | [`R` vs `SAS`](https://psiaims.github.io/CAMIS/Comp/r-sas_rounding.html) |
| | Summary Statistics | [`R`](https://psiaims.github.io/CAMIS/R/summary-stats.html) | [`SAS`](https://psiaims.github.io/CAMIS/SAS/summary-stats.html) | [`R` vs `SAS`](https://psiaims.github.io/CAMIS/Comp/r-sas-summary-stats.html) |
| ... | ... | ... | ... | ... |
: [CAMIS Comparisons Resources](https://psiaims.github.io/CAMIS/)
:::
## 🤝 Affiliates: ![](assets/r-consortium.png){height="1.2em" style="padding: 0.2em; margin: 0 0.5em 0 0; border-radius: 0.8em; background: #FFF; vertical-align: middle;"} [R Consortium]{.hidden} {transition="slide-in slide-out"}
::: {style="font-size: 0.7em"}
> Works with and provides support to the R Foundation and to the key
> organizations developing, maintaining, distributing and using R software
:::
### Key Activities
* The R Validation Hub
* R Submission Working Group
* R Repositories Working Group (ie CRAN enhancements, future development)
## 👷♂️ What We Do ([pharmaR.org](https://www.pharmaR.org)) {transition="slide-in slide-out"}
### Products {.center}
::::: {.columns}
:::: {.column width="29%" .panel}
#### White Paper
Guidance on compliant use of R and management of packages
::::
:::: {.column width="29%" .panel}
#### [New!]{.badge-pill} Repositories
Building a public, validation-ready resource for R packages
::: {.person}
Coline Zeballos
:::
::::
:::: {.column width="29%" .panel}
#### [New!]{.badge-pill} Communications
Connecting validation experts across the industry
::: {.person}
Juliane Manitz
:::
::::
:::::
::::: {.columns}
:::: {.column width="29%" .panel}
#### [`{riskmetric}`](https://github.com/pharmaR/riskmetric)
Gather and report on risk heuristics to support validation decision-making
::: {.person}
Eric Milliman
:::
::::
:::: {.column width="29%" .panel}
#### [`{riskassessment}`](https://github.com/pharmaR/riskassessment)
A web interface to `{riskmetric}`, supporting review,
annotation and cataloging of decisions
::: {.person}
Aaron Clark
:::
::::
:::: {.column width="29%" .panel}
#### [New!]{.badge-pill} [`{riskscore}`](https://github.com/pharmaR/riskscore)
An R data package capturing risk metrics across all of CRAN
::: {.person}
Aaron Clark
:::
::::
:::::