From 105a6838e4b9802acc007778c494dcd000a76030 Mon Sep 17 00:00:00 2001 From: universalmind303 Date: Fri, 5 Jul 2024 17:56:47 -0500 Subject: [PATCH] wip --- __tests__/dataframe.test.ts | 12 + package-lock.json | 3860 +++++++++++++++++++++++++++++++++++ package.json | 5 +- polars/dataframe.ts | 41 +- src/dataframe.rs | 87 +- yarn.lock | 1838 ++++++++--------- 6 files changed, 4893 insertions(+), 950 deletions(-) create mode 100644 package-lock.json diff --git a/__tests__/dataframe.test.ts b/__tests__/dataframe.test.ts index b66a1c277..67a2ff73b 100644 --- a/__tests__/dataframe.test.ts +++ b/__tests__/dataframe.test.ts @@ -2,6 +2,7 @@ import pl from "@polars"; import { Stream } from "stream"; import fs from "fs"; +import { StructRow } from "apache-arrow"; describe("dataframe", () => { const df = pl.DataFrame([ pl.Series("foo", [1, 2, 9], pl.Int16), @@ -2583,3 +2584,14 @@ describe("additional", () => { expect(actual.shape).toEqual({ height: 174_241, width: 3 }); }); }); + +test("arrow integration", () => { + const df = pl.DataFrame({ + a: [1, 2, 3], + b: ["a", "b", "c"], + c: [true, false, true], + }); + const fromArrow = df.toArrow().toArray(); + + expect(fromArrow[0].toJSON()).toEqual({ a: 1, b: "a", c: true }); +}); diff --git a/package-lock.json b/package-lock.json new file mode 100644 index 000000000..27496edbe --- /dev/null +++ b/package-lock.json @@ -0,0 +1,3860 @@ +{ + "name": "nodejs-polars", + "version": "0.13.0", + "lockfileVersion": 3, + "requires": true, + "packages": { + "": { + "name": "nodejs-polars", + "version": "0.13.0", + "license": "MIT", + "workspaces": [ + "benches" + ], + "devDependencies": { + "@biomejs/biome": "=1.7.3", + "@napi-rs/cli": "^2.18.3", + "@types/chance": "^1.1.6", + "@types/jest": "^29.5.12", + "@types/node": "^20.12.12", + "chance": "^1.1.11", + "jest": "^29.7.0", + "source-map-support": "^0.5.21", + "ts-jest": "^29.1.3", + "ts-node": "^10.9.2", + "typedoc": "^0.25.13", + "typescript": "5.4.5" + }, + "engines": { + "node": ">= 18" + }, + "peerDependencies": { + "apache-arrow": "^16.1.0" + } + }, + "benches": { + "dependencies": { + "lodash": "^4.17.21", + "ramda": "^0.27.1" + } + }, + "node_modules/@75lb/deep-merge": { + "version": "1.1.1", + "resolved": "https://registry.npmjs.org/@75lb/deep-merge/-/deep-merge-1.1.1.tgz", + "integrity": "sha512-xvgv6pkMGBA6GwdyJbNAnDmfAIR/DfWhrj9jgWh3TY7gRm3KO46x/GPjRg6wJ0nOepwqrNxFfojebh0Df4h4Tw==", + "peer": true, + "dependencies": { + "lodash.assignwith": "^4.2.0", + "typical": "^7.1.1" + }, + "engines": { + "node": ">=12.17" + } + }, + "node_modules/@75lb/deep-merge/node_modules/typical": { + "version": "7.1.1", + "resolved": "https://registry.npmjs.org/typical/-/typical-7.1.1.tgz", + "integrity": "sha512-T+tKVNs6Wu7IWiAce5BgMd7OZfNYUndHwc5MknN+UHOudi7sGZzuHdCadllRuqJ3fPtgFtIH9+lt9qRv6lmpfA==", + "peer": true, + "engines": { + "node": ">=12.17" + } + }, + "node_modules/@ampproject/remapping": { + "version": "2.3.0", + "dev": true, + "license": "Apache-2.0", + 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* @example + * ``` + * > df.toRecords({useArrow: true}) + * [ + * {"foo":1.0,"bar":"a"}, + * {"foo":2.0,"bar":"b"}, + * {"foo":3.0,"bar":"c"} + * ] + * ``` + * @category IO + */ + toRecords(options: { useArrow: true }): Record[]; /** * compat with `JSON.stringify` @@ -1479,6 +1497,10 @@ export interface DataFrame * @category IO */ toObject(): Record; + /** + * Converts dataframe into an Apache Arrow Table + */ + toArrow(): import('apache-arrow').Table; /** * @deprecated *since 0.4.0* use {@link writeIPC} @@ -2383,7 +2405,11 @@ export const _DataFrame = (_df: any): DataFrame => { return Buffer.concat(buffers); }, - toRecords() { + toRecords(opts?: {useArrow: true}) { + if (opts?.useArrow) { + return this.toArrow().toArray(); + + } return _df.toObjects(); }, toJSON(...args: any[]) { @@ -2433,6 +2459,19 @@ export const _DataFrame = (_df: any): DataFrame => { return acc; }, {}); }, + toArrow(): import("apache-arrow").Table { + // biome-ignore lint/style/noVar: + var arrow: typeof import("apache-arrow") | undefined; + try { + arrow = require("apache-arrow"); + } catch (e) { + throw new Error("toArrow requires the 'apache-arrow' package"); + } + const buf = Buffer.from(_df.writeIpcBuffer()); + // biome-ignore lint/style/noNonNullAssertion: we already checked if arrow is defined + const tbl = arrow!.tableFromIPC(buf); + return tbl; + }, writeJSON(dest?, options = { format: "lines" }) { if (dest instanceof Writable || typeof dest === "string") { return _df.writeJson(dest, options) as any; diff --git a/src/dataframe.rs b/src/dataframe.rs index 8f44480d2..fcfa6058a 100644 --- a/src/dataframe.rs +++ b/src/dataframe.rs @@ -13,18 +13,6 @@ use std::fs::File; use std::io::{BufReader, BufWriter, Cursor}; use std::num::NonZeroUsize; -#[napi] -#[repr(transparent)] -#[derive(Clone)] -pub struct JsDataFrame { - pub(crate) df: DataFrame, -} - -impl JsDataFrame { - pub(crate) fn new(df: DataFrame) -> JsDataFrame { - JsDataFrame { df } - } -} impl From for JsDataFrame { fn from(s: DataFrame) -> JsDataFrame { JsDataFrame::new(s) @@ -437,30 +425,16 @@ pub fn from_rows( } #[napi] -impl JsDataFrame { - #[napi(catch_unwind)] - pub fn to_js(&self, env: Env) -> napi::Result { - env.to_js_value(&self.df) - } - - #[napi(catch_unwind)] - pub fn serialize(&self, format: String) -> napi::Result { - let buf = match format.as_ref() { - "bincode" => bincode::serialize(&self.df) - .map_err(|err| napi::Error::from_reason(format!("{:?}", err)))?, - "json" => serde_json::to_vec(&self.df) - .map_err(|err| napi::Error::from_reason(format!("{:?}", err)))?, - _ => { - return Err(napi::Error::from_reason( - "unexpected format. \n supported options are 'json', 'bincode'".to_owned(), - )) - } - }; - Ok(Buffer::from(buf)) - } +#[repr(transparent)] +#[derive(Clone)] +pub struct JsDataFrame { + pub(crate) df: DataFrame, +} +#[napi] +impl JsDataFrame { #[napi(factory, catch_unwind)] - pub fn deserialize(buf: Buffer, format: String) -> napi::Result { + pub fn deserialize(buf: Buffer, format: String) -> napi::Result { let df: DataFrame = match format.as_ref() { "bincode" => bincode::deserialize(&buf) .map_err(|err| napi::Error::from_reason(format!("{:?}", err)))?, @@ -474,8 +448,9 @@ impl JsDataFrame { }; Ok(df.into()) } - #[napi(constructor)] - pub fn from_columns(columns: Array) -> napi::Result { + + #[napi(constructor, catch_unwind)] + pub fn from_columns(columns: Array) -> napi::Result { let len = columns.len(); let cols: Vec = (0..len) .map(|idx| { @@ -487,13 +462,40 @@ impl JsDataFrame { let df = DataFrame::new(cols).map_err(JsPolarsErr::from)?; Ok(JsDataFrame::new(df)) } +} +#[napi] +impl JsDataFrame { + pub(crate) fn new(df: DataFrame) -> JsDataFrame { + JsDataFrame { df } + } #[napi(catch_unwind)] + pub fn to_js(&self, env: Env) -> napi::Result { + env.to_js_value(&self.df) + } + + #[napi(catch_unwind)] + pub fn serialize(&self, format: String) -> napi::Result { + let buf = match format.as_ref() { + "bincode" => bincode::serialize(&self.df) + .map_err(|err| napi::Error::from_reason(format!("{:?}", err)))?, + "json" => serde_json::to_vec(&self.df) + .map_err(|err| napi::Error::from_reason(format!("{:?}", err)))?, + _ => { + return Err(napi::Error::from_reason( + "unexpected format. \n supported options are 'json', 'bincode'".to_owned(), + )) + } + }; + Ok(Buffer::from(buf)) + } + + #[napi] pub fn estimated_size(&self) -> u32 { self.df.estimated_size() as u32 } - #[napi(catch_unwind)] + #[napi] pub fn to_string(&self) -> String { format!("{:?}", self.df) } @@ -1401,6 +1403,7 @@ impl JsDataFrame { }; Ok(()) } + #[napi(catch_unwind)] pub fn write_ipc( &mut self, @@ -1433,6 +1436,16 @@ impl JsDataFrame { }; Ok(()) } + #[napi(catch_unwind)] + pub fn write_ipc_buffer(&mut self) -> napi::Result { + let mut buf = Vec::new(); + IpcWriter::new(&mut buf) + .finish(&mut self.df) + .map_err(JsPolarsErr::from)?; + + Ok(buf.into()) + } + #[napi(catch_unwind)] pub fn write_json( &mut self, diff --git a/yarn.lock b/yarn.lock index 8f147f2a0..cdfaf1435 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agent-base: ^7.1.0 + http-proxy-agent: ^7.0.0 + https-proxy-agent: ^7.0.1 + lru-cache: ^10.0.1 + socks-proxy-agent: ^8.0.3 checksum: 67de7b88cc627a79743c88bab35e023e23daf13831a8aa4e15f998b92f5507b644d8ffc3788afc8e64423c612e0785a6a92b74782ce368f49a6746084b50d874 languageName: node linkType: hard @@ -850,7 +854,7 @@ __metadata: version: 3.1.1 resolution: "@npmcli/fs@npm:3.1.1" dependencies: - semver: "npm:^7.3.5" + semver: ^7.3.5 checksum: d960cab4b93adcb31ce223bfb75c5714edbd55747342efb67dcc2f25e023d930a7af6ece3e75f2f459b6f38fc14d031c766f116cd124fdc937fd33112579e820 languageName: node linkType: hard @@ -873,7 +877,7 @@ __metadata: version: 3.0.1 resolution: "@sinonjs/commons@npm:3.0.1" dependencies: - type-detect: "npm:4.0.8" + type-detect: 4.0.8 checksum: a7c3e7cc612352f4004873747d9d8b2d4d90b13a6d483f685598c945a70e734e255f1ca5dc49702515533c403b32725defff148177453b3f3915bcb60e9d4601 languageName: node linkType: hard @@ -882,7 +886,7 @@ __metadata: version: 10.3.0 resolution: 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"@babel/types": "npm:^7.0.0" + "@babel/types": ^7.0.0 checksum: 5b332ea336a2efffbdeedb92b6781949b73498606ddd4205462f7d96dafd45ff3618770b41de04c4881e333dd84388bfb8afbdf6f2764cbd98be550d85c6bb48 languageName: node linkType: hard @@ -941,8 +945,8 @@ __metadata: version: 7.4.4 resolution: "@types/babel__template@npm:7.4.4" dependencies: - "@babel/parser": "npm:^7.1.0" - "@babel/types": "npm:^7.0.0" + "@babel/parser": ^7.1.0 + "@babel/types": ^7.0.0 checksum: d7a02d2a9b67e822694d8e6a7ddb8f2b71a1d6962dfd266554d2513eefbb205b33ca71a0d163b1caea3981ccf849211f9964d8bd0727124d18ace45aa6c9ae29 languageName: node linkType: hard @@ -951,7 +955,7 @@ __metadata: version: 7.20.6 resolution: "@types/babel__traverse@npm:7.20.6" dependencies: - "@babel/types": "npm:^7.20.7" + "@babel/types": ^7.20.7 checksum: 2bdc65eb62232c2d5c1086adeb0c31e7980e6fd7e50a3483b4a724a1a1029c84d9cb59749cf8de612f9afa2bc14c85b8f50e64e21f8a4398fa77eb9059a4283c languageName: node linkType: hard @@ -967,7 +971,7 @@ __metadata: 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languageName: node linkType: hard @@ -2316,12 +2323,12 @@ __metadata: version: 29.7.0 resolution: "jest-environment-node@npm:29.7.0" dependencies: - "@jest/environment": "npm:^29.7.0" - "@jest/fake-timers": "npm:^29.7.0" - "@jest/types": "npm:^29.6.3" - "@types/node": "npm:*" - jest-mock: "npm:^29.7.0" - jest-util: "npm:^29.7.0" + "@jest/environment": ^29.7.0 + "@jest/fake-timers": ^29.7.0 + "@jest/types": ^29.6.3 + "@types/node": "*" + jest-mock: ^29.7.0 + jest-util: ^29.7.0 checksum: 501a9966292cbe0ca3f40057a37587cb6def25e1e0c5e39ac6c650fe78d3c70a2428304341d084ac0cced5041483acef41c477abac47e9a290d5545fd2f15646 languageName: node linkType: hard @@ -2337,18 +2344,18 @@ __metadata: version: 29.7.0 resolution: "jest-haste-map@npm:29.7.0" dependencies: - "@jest/types": "npm:^29.6.3" - "@types/graceful-fs": "npm:^4.1.3" - "@types/node": "npm:*" - anymatch: "npm:^3.0.3" - fb-watchman: "npm:^2.0.0" - fsevents: "npm:^2.3.2" - graceful-fs: "npm:^4.2.9" - jest-regex-util: "npm:^29.6.3" - jest-util: "npm:^29.7.0" - jest-worker: "npm:^29.7.0" - micromatch: "npm:^4.0.4" - walker: "npm:^1.0.8" + "@jest/types": ^29.6.3 + "@types/graceful-fs": ^4.1.3 + "@types/node": "*" + anymatch: ^3.0.3 + fb-watchman: ^2.0.0 + fsevents: ^2.3.2 + graceful-fs: ^4.2.9 + jest-regex-util: ^29.6.3 + jest-util: ^29.7.0 + jest-worker: ^29.7.0 + micromatch: ^4.0.4 + walker: ^1.0.8 dependenciesMeta: fsevents: optional: true @@ -2360,8 +2367,8 @@ __metadata: version: 29.7.0 resolution: "jest-leak-detector@npm:29.7.0" dependencies: - jest-get-type: "npm:^29.6.3" - pretty-format: "npm:^29.7.0" + jest-get-type: ^29.6.3 + pretty-format: ^29.7.0 checksum: e3950e3ddd71e1d0c22924c51a300a1c2db6cf69ec1e51f95ccf424bcc070f78664813bef7aed4b16b96dfbdeea53fe358f8aeaaea84346ae15c3735758f1605 languageName: node linkType: hard @@ -2370,10 +2377,10 @@ __metadata: version: 29.7.0 resolution: "jest-matcher-utils@npm:29.7.0" dependencies: - chalk: "npm:^4.0.0" - jest-diff: "npm:^29.7.0" - jest-get-type: "npm:^29.6.3" - 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"@types/node": "npm:*" - chalk: "npm:^4.0.0" - emittery: "npm:^0.13.1" - graceful-fs: "npm:^4.2.9" - jest-docblock: "npm:^29.7.0" - jest-environment-node: "npm:^29.7.0" - jest-haste-map: "npm:^29.7.0" - jest-leak-detector: "npm:^29.7.0" - jest-message-util: "npm:^29.7.0" - jest-resolve: "npm:^29.7.0" - jest-runtime: "npm:^29.7.0" - jest-util: "npm:^29.7.0" - jest-watcher: "npm:^29.7.0" - jest-worker: "npm:^29.7.0" - p-limit: "npm:^3.1.0" - source-map-support: "npm:0.5.13" + "@jest/console": ^29.7.0 + "@jest/environment": ^29.7.0 + "@jest/test-result": ^29.7.0 + "@jest/transform": ^29.7.0 + "@jest/types": ^29.6.3 + "@types/node": "*" + chalk: ^4.0.0 + emittery: ^0.13.1 + graceful-fs: ^4.2.9 + jest-docblock: ^29.7.0 + jest-environment-node: ^29.7.0 + jest-haste-map: ^29.7.0 + jest-leak-detector: ^29.7.0 + jest-message-util: ^29.7.0 + jest-resolve: ^29.7.0 + jest-runtime: ^29.7.0 + jest-util: ^29.7.0 + jest-watcher: ^29.7.0 + jest-worker: ^29.7.0 + p-limit: ^3.1.0 + source-map-support: 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