cluster.json

{
    "__default__" :
    {
        "t" : "36:00:00",
        "N" : 1,
        "partition" : "exacloud",
        "J" : "{rule}.{wildcards}",
        "o" : "logs/{rule}/{wildcards}_{rule}%j.out",
        "e" : "logs/{rule}/{wildcards}_{rule}%j.err",
        "c" : 24,
        "mem" : 45000
    },
    "deseq" :
    {
        "J" : "deseq",
        "e" : "logs/deseq/deseq%j.err",
        "o" : "logs/deseq/deseq%j.out",
        "c" : 24,
        "mem" : 45000
    },
    "deseq_plots" :
    {
        "J" : "deseq_plots",
        "e" : "logs/deseq_plots/deseq_plots%j.err",
        "o" : "logs/deseq_plots/deseq_plots%j.out",
        "c" : 6,
        "mem" : 5000
    },
    "deseq_normd_init" :
    {
        "J" : "deseq_normd_init",
        "e" : "logs/deseq_normd_init/deseq_normd_init%j.err",
        "o" : "logs/deseq_normd_init/deseq_normd_init%j.out",
        "c" : 20,
        "mem" : 45000
    },
    "deseq_normd" :
    {
        "J" : "deseq_normd",
        "e" : "logs/deseq_normd/deseq_normd%j.err",
        "o" : "logs/deseq_normd/deseq_normd%j.out",
        "c" : 2,
        "mem" : 45000
    }
}