setup.py

import setuptools

with open("README.md", "r") as fh:
    long_description = fh.read()
files = ['snakemake/hypercluster.smk', 'snakemake/config.yml']
setuptools.setup(
    name="hypercluster",
    version="0.1.13",
    author="Lili Blumenberg, Ruggles Lab",
    author_email="lili.blumenberg@gmail.com",
    description="A package for automatic clustering hyperparameter optmization",
    long_description=long_description,
    long_description_content_type="text/markdown",
    url="https://github.com/liliblu/hypercluster",
    classifiers=[
        "Programming Language :: Python :: 3.7",
        "License :: OSI Approved :: MIT License",
        "Operating System :: MacOS",
        "Operating System :: Unix",
    ],
    install_requires=[
        "pandas >= 0.24.2",
        "numpy >= 1.16.4",
        "scipy >= 1.2.1",
        "matplotlib >= 3.1.0",
        "seaborn >= 0.9.0",
        "scikit-learn >= 0.22.0",
        "hdbscan >= 0.8.24",
        "snakemake >= 5.8.2",
        "python-igraph >=0.7.1",
        "leidenalg >=0.7.0",
        "louvain >=0.6.1"
    ],
    package_data={"hypercluster": files},
    packages=setuptools.find_packages()
)