_output.yml

bookdown::gitbook:
#bookdown::html_book:
#  theme: darkly
# Favicon for the course 
  favicon: "images/agapefavicon.ico"
# More details on the highlight options is available in https://bookdown.org/yihui/bookdown/yaml-options.html
  highlight: breezedark
# Cover image for the course 
  cover-image: "images/agapecover.png"
  css: style.css
# Toolbar configuration
  repo: OpenDoorProject
  twitter-handle: AgapeOpenSci
  facebok-handle: Agape Open-Science
  instagram-handle: Agape.Open.Science
  includes:
      before_body: assets/header.html
      in_header: assets/google_analytics.html
      after_body: assets/footer.html
#in_header: [assets/header.html, assets/google_analytics.html]  
#Table of content configuration
  config:
    toc:
      collapse: subsection
      scroll_highlight: true
# Display upto 'header 4' level
      toc_depth: 4
      css : toc.css
      before: |
        <li><a href="./">AGAPE: An introductory course to open science for early career researchers</a></li>
        <li class="toc-logo"><a href="./"><img src="images/agapecover.png"></a></li>
      after: |
        <li><a href="https://github.com/rstudio/bookdown" target="blank">Published with bookdown</a></li>
        <a rel="license" href="http://creativecommons.org/licenses/by/4.0/"><img alt="Creative Commons License" style="border-width:0" src="https://licensebuttons.net/l/by-nc/4.0/88x31.png" /></a><br />This work is licensed under a <a rel="license" href="http://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution 4.0 International License</a>
# toolbar configuration
    edit: https://github.com/sa1987/OpenDoorProject/edit/master/%s
    sharing:
        twitter: yes
        facebook: yes
        github: yes
        instagram: yes
    download: ["pdf", "epub"]
bookdown::pdf_book:
  includes:
    in_header: preamble.tex
  latex_engine: xelatex
  citation_package: natbib
  keep_tex: yes
bookdown::epub_book: default