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Boundaries of sequences or blocks #6

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xjlizji opened this issue Dec 3, 2019 · 0 comments
Open

Boundaries of sequences or blocks #6

xjlizji opened this issue Dec 3, 2019 · 0 comments
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enhancement New feature or request

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@xjlizji
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xjlizji commented Dec 3, 2019

We've ignored phi_0 and phi_1 (the two ends in Gibbs measure) so far, because the sequence is usually long enough. However if we analyze multi-species data, the boundaries of blocks cannot be ignored anymore. We might need to find a way to parameterize duplet rates but I'm not sure if it's the best way, because it introduces more parameters (something similar to "baseline" parameters).
@xjlizji xjlizji added the enhancement New feature or request label Dec 3, 2019
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