.gitignore

#######################
# Start by ignoring everything, and below we are explicitly saying
# what to not ignore
*

#######################
# List of files with GitHub functionality anywhere in the repo
# that we do not want to ignore

# These files include GitHub settings
!.gitignore
!.gitattributes
#.io page
_config.yml

# Keep markdown files used for documentation on GitHub
!README.md
!CONTRIBUTING.md
!LICENSE

#######################
# For performance reasons, if a folder is already ignored, then
# GitHub does not check the content for that folder for matches
# with additional rules. The line below includes folder in the
# top folder (but not their content), so that anything matching
# the rules below will still not be ignored.
!*/

.ipynb_checkpoints
*/.ipynb_checkpoints/*

#######################
# The following file types are code that should always be
# included 

# R
!/**/*.R
!/**/*.Rmd

# LaTeX
!/**/*.tex
!/**/*.cls
!/**/*.tff

# Python
!/**/*.py
!/**/*.ipynb

# Matlab
!/**/*.m
!/**/*.fig

# C++
!/**/*.cpp
!/**/*.ino

# Bash
!/**/*.sh

# Plain text
#!/**/*.txt

# Markdown
!/**/*.md

# Keep dockerfiles
!/**/Dockerfile
!/**/*.yml